Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 U8.19-201ENST00000459095 133 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 Y_RNA.637-201ENST00000459424 114 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 SNORA44.1-201ENST00000517031 108 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 AL358944.1-201ENST00000528537 144 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 MIR4435-1-201ENST00000582552 80 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 AP003357.1-201ENST00000604497 148 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 MIR548AY-201ENST00000617669 107 ntBASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATPAF1Q5TC12 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 RNU4-41P-201ENST00000364426 143 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 MIR221-201ENST00000385135 110 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AL034345.1-201ENST00000407768 123 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 MIR1267-201ENST00000408723 78 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 RNU7-116P-201ENST00000516940 62 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 SNORA77B-201ENST00000578179 125 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AC064859.1-201ENST00000624741 174 ntBASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.85□□□□□ -2.11
ATPAF1Q5TC12 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 MIR335-201ENST00000362173 94 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 Y_RNA.217-201ENST00000364214 105 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RNU6-574P-201ENST00000384265 107 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 MIR30A-201ENST00000385092 71 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RNA5SP508-201ENST00000411327 119 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 Z98949.2-201ENST00000440996 144 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 Y_RNA.641-201ENST00000459414 105 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RPL23AP54-201ENST00000495129 419 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 OR9P1P-201ENST00000496431 281 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 AC008834.1-201ENST00000511612 175 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RNU1-40P-201ENST00000516816 164 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 RNU1-97P-201ENST00000516872 164 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 AC127455.1-201ENST00000565496 145 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 MIR4503-201ENST00000582187 83 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 AL162424.1-201ENST00000602325 221 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 SNORA28-201ENST00000606769 126 ntBASIC1.84□□□□□ -2.11
ATPAF1Q5TC12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
ATPAF1Q5TC12 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 RNU6-1272P-201ENST00000362776 107 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.117-201ENST00000363294 101 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 RNU6-196P-201ENST00000384315 107 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 RNA5SP425-201ENST00000410336 112 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 RNU2-38P-201ENST00000410856 79 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 BTF3P11-201ENST00000426582 477 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 SNORD127-201ENST00000458892 86 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 RNU7-28P-201ENST00000516759 62 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 MIR1273D-201ENST00000577266 86 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 MIR3935-201ENST00000583472 104 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 AC012433.1-201ENST00000588916 398 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 snoU18.1-201ENST00000629629 71 ntBASIC1.83□□□□□ -2.12
ATPAF1Q5TC12 AC092881.1-201ENST00000638218 2733 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 AC068700.1-201ENST00000565862 3754 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 UBE2WP1-201ENST00000362030 340 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.44-201ENST00000362676 108 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.288-201ENST00000364854 92 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 SNORA67.3-201ENST00000384366 140 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.518-201ENST00000384552 113 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 MIR194-1-201ENST00000384892 85 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 RNA5SP482-201ENST00000391269 118 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 SNORA36B-201ENST00000410438 131 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 CALM2P4-201ENST00000430810 426 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 MIR3198-2-201ENST00000577868 80 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 AL078604.3-201ENST00000615580 211 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 U2.14-201ENST00000615943 113 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 AL591926.4-201ENST00000616895 298 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 AC073349.3-201ENST00000617616 186 ntBASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ATPAF1Q5TC12 SNORD68-201ENST00000363214 84 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 RNU6-899P-201ENST00000363947 107 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.275-201ENST00000364726 110 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 RNU6-740P-201ENST00000364734 105 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 RNU6-1289P-201ENST00000384431 106 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.556-201ENST00000384677 113 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 snosnR66.1-201ENST00000391095 99 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 SNORA3.2-201ENST00000408221 125 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 AC004965.1-201ENST00000413033 213 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 Z98742.3-201ENST00000418637 326 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 RNA5SP168-201ENST00000516642 112 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 AC005357.1-201ENST00000588399 301 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 U4.1-201ENST00000620349 87 ntBASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.144-201ENST00000363521 113 ntBASIC1.8□□□□□ -2.12
ATPAF1Q5TC12 Y_RNA.253-201ENST00000364562 112 ntBASIC1.8□□□□□ -2.12
ATPAF1Q5TC12 U8.16-201ENST00000391279 133 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms