Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC110588.1-201ENST00000559699 137 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AC006504.6-201ENST00000590142 199 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 AL513423.1-201ENST00000621695 132 ntBASIC1.85□□□□□ -2.11
CCDC38Q502W7 Y_RNA.19-201ENST00000362462 99 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.310-201ENST00000365063 113 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC38Q502W7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC38Q502W7 LINC01399-202ENST00000458450 244 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 MRPS35P2-201ENST00000508242 191 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC38Q502W7 CBX3P4-201ENST00000538909 354 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 MIR3145-201ENST00000580727 82 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 MIR4422-201ENST00000581938 83 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.812-201ENST00000610788 101 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.784-201ENST00000613803 101 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.787-201ENST00000616522 101 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.780-201ENST00000617336 101 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 Y_RNA.801-201ENST00000619005 101 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 MIR8063-201ENST00000621930 81 ntBASIC1.84□□□□□ -2.11
CCDC38Q502W7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CCDC38Q502W7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC38Q502W7 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 RNU6-102P-201ENST00000384485 104 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 MIR583-201ENST00000384846 75 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 RNU1-78P-201ENST00000391248 165 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 OR9P1P-201ENST00000496431 281 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC38Q502W7 AC011604.1-201ENST00000545978 196 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
CCDC38Q502W7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC38Q502W7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC38Q502W7 SNORD33-201ENST00000362761 85 ntBASIC1.82□□□□□ -2.12
CCDC38Q502W7 RNU6-1323P-201ENST00000384025 107 ntBASIC1.82□□□□□ -2.12
CCDC38Q502W7 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
CCDC38Q502W7 AL590004.1-201ENST00000405321 300 ntBASIC1.82□□□□□ -2.12
CCDC38Q502W7 RNU6-295P-201ENST00000516901 104 ntBASIC1.82□□□□□ -2.12
CCDC38Q502W7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC38Q502W7 RNU4-80P-201ENST00000363200 141 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 RNA5SP99-201ENST00000364020 114 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 SNORD1A-201ENST00000364968 72 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 SNORA72-201ENST00000384339 132 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 Y_RNA.569-201ENST00000384749 103 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 MIR513A1-201ENST00000385138 129 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 RPL30P13-201ENST00000418873 348 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 AL731563.1-201ENST00000442202 214 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 U8.19-201ENST00000459095 133 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 Y_RNA.638-201ENST00000459374 113 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 RNU7-116P-201ENST00000516940 62 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC38Q502W7 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 PRR13P7-201ENST00000605538 430 ntBASIC1.81□□□□□ -2.12
CCDC38Q502W7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC38Q502W7 RNU6-290P-201ENST00000365212 101 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 RNU6-424P-201ENST00000384367 105 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 RNU6-1160P-201ENST00000384546 104 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 MIR660-201ENST00000385235 97 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CCDC38Q502W7 AC113618.1-201ENST00000416747 285 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 AC098869.1-201ENST00000481627 292 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 AC079140.2-201ENST00000506193 142 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 AP003733.2-201ENST00000529409 171 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC38Q502W7 AL353997.5-201ENST00000618886 171 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 SNORD3E-202ENST00000627253 216 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 AC068647.2-201ENST00000637380 353 ntBASIC1.8□□□□□ -2.12
CCDC38Q502W7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CCDC38Q502W7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC38Q502W7 MIR126-201ENST00000362291 85 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 snoU2_19.2-201ENST00000363024 80 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNU4-41P-201ENST00000364426 143 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNU6-806P-201ENST00000365147 105 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNU6-1080P-201ENST00000383982 107 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNU6-482P-201ENST00000391068 107 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 AC245517.4-201ENST00000448601 281 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 MTND4LP30-201ENST00000454092 297 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNU6-191P-201ENST00000516295 94 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 RNA5SP168-201ENST00000516642 112 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 AC136628.3-201ENST00000521868 290 ntBASIC1.79□□□□□ -2.12
CCDC38Q502W7 Y_RNA.64-201ENST00000362845 102 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 RNA5SP259-201ENST00000365541 109 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 MIR606-201ENST00000384851 96 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 RPL21P38-201ENST00000418090 167 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 CALM2P4-201ENST00000430810 426 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 AL135790.2-201ENST00000437701 267 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 Z98949.2-201ENST00000440996 144 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 Y_RNA.720-201ENST00000517166 92 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 SUMO2P16-201ENST00000519475 264 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 POLR3GP1-201ENST00000594073 261 ntBASIC1.78□□□□□ -2.12
CCDC38Q502W7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC38Q502W7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms