Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC016909.1-201ENST00000415916 166 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 AC091021.1-201ENST00000468051 388 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RPS26P55-201ENST00000471178 356 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNU6-1337P-201ENST00000516525 95 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNU2-34P-201ENST00000516534 121 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNA5SP490-201ENST00000517141 136 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 MIR3144-201ENST00000579460 79 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 RNU2-4P-201ENST00000606190 192 ntBASIC2.46□□□□□ -2.02
SF3B3Q15393 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SF3B3Q15393 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SF3B3Q15393 RNU6-271P-201ENST00000363858 105 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 RNU4-10P-201ENST00000364383 140 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 SNORA16B-201ENST00000364674 135 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 Y_RNA.412-201ENST00000384001 104 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 RNU6-804P-201ENST00000384286 107 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 RNU5E-9P-201ENST00000411164 104 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 MTCO1P44-201ENST00000441935 243 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 AC010531.2-201ENST00000465012 153 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 AC079804.2-201ENST00000490376 200 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.45□□□□□ -2.02
SF3B3Q15393 AC093259.1-201ENST00000509755 300 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 AC108706.1-201ENST00000611053 297 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 AC006435.5-201ENST00000624486 112 ntBASIC2.45□□□□□ -2.02
SF3B3Q15393 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
SF3B3Q15393 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
SF3B3Q15393 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SF3B3Q15393 Y_RNA.75-201ENST00000362927 97 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 snoU2_19.4-201ENST00000364329 80 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 Y_RNA.293-201ENST00000364908 93 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 RNY1P5-201ENST00000383890 115 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 SNORD116-13-201ENST00000384408 92 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 SNORA8.3-201ENST00000384679 139 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 RNU2-63P-201ENST00000410792 194 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 RNA5SP270-201ENST00000411361 118 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 AL137159.1-201ENST00000452808 512 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.44□□□□□ -2.02
SF3B3Q15393 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.44□□□□□ -2.02
SF3B3Q15393 AC004832.4-201ENST00000608952 331 ntBASIC2.44□□□□□ -2.02
SF3B3Q15393 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SF3B3Q15393 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.43□□□□□ -2.02
SF3B3Q15393 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 Y_RNA.23-201ENST00000362496 106 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU1-17P-201ENST00000363022 152 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU6-743P-201ENST00000364151 106 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU6-312P-201ENST00000364629 107 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 U8.7-201ENST00000364940 136 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU1-148P-201ENST00000384472 162 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 Y_RNA.572-201ENST00000384757 98 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 MIR526A2-201ENST00000390198 65 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 SNORA40.18-201ENST00000391200 128 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 AC123900.1-201ENST00000420390 96 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 AL357134.1-201ENST00000445848 426 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RPS27P21-201ENST00000486977 252 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RPL36AP21-201ENST00000490372 323 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.43□□□□□ -2.02
SF3B3Q15393 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU7-200P-201ENST00000516105 62 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RN7SKP164-201ENST00000516138 266 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 RNU6-789P-201ENST00000517105 102 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 MTND5P41-201ENST00000517498 206 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.43□□□□□ -2.02
SF3B3Q15393 AC104465.1-201ENST00000611365 139 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 Y_RNA.802-201ENST00000614892 130 ntBASIC2.43□□□□□ -2.02
SF3B3Q15393 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SF3B3Q15393 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SF3B3Q15393 RNU6-1205P-201ENST00000363625 106 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 Y_RNA.182-201ENST00000363880 111 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 RNU6-1240P-201ENST00000365155 104 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 RNU6-407P-201ENST00000365280 104 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 RNU6-144P-201ENST00000383951 107 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 AC018868.1-201ENST00000491307 315 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 RNA5SP20-201ENST00000515976 84 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 RNU7-115P-201ENST00000516433 55 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 CYCSP26-201ENST00000534107 320 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 MIR5688-201ENST00000580619 83 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 AL355297.2-201ENST00000604792 129 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 MIR548AY-201ENST00000617669 107 ntBASIC2.42□□□□□ -2.02
SF3B3Q15393 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SF3B3Q15393 MIRLET7G-201ENST00000362280 84 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 RNU6-103P-201ENST00000363686 107 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 Y_RNA.272-201ENST00000364696 102 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 RNU6-275P-201ENST00000364910 107 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 RNU6-117P-201ENST00000365415 107 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 Y_RNA.398-201ENST00000383952 99 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 RNU6-1323P-201ENST00000384025 107 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 MIR561-201ENST00000385216 97 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 HSPE1P21-201ENST00000438283 308 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 AC117454.1-201ENST00000491120 168 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 RNA5SP458-201ENST00000516188 119 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 AC027419.1-201ENST00000522976 328 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 SNRPGP19-201ENST00000603826 189 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 AP003357.1-201ENST00000604497 148 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 AC068647.2-201ENST00000637380 353 ntBASIC2.41□□□□□ -2.02
SF3B3Q15393 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SF3B3Q15393 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SF3B3Q15393 Y_RNA.8-201ENST00000362353 102 ntBASIC2.4□□□□□ -2.03
SF3B3Q15393 Y_RNA.24-201ENST00000362508 103 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms