Protein–RNA interactions for Protein: Q15270

NKX1-1, NK1 transcription factor-related protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-1Q15270 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NKX1-1Q15270 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
NKX1-1Q15270 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX1-1Q15270 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NKX1-1Q15270 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NKX1-1Q15270 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX1-1Q15270 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.33□□□□□ -1.72
NKX1-1Q15270 Y_RNA.107-201ENST00000363190 121 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 Y_RNA.507-201ENST00000384500 99 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.33□□□□□ -1.72
NKX1-1Q15270 TRBV12-1-201ENST00000479785 344 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 RNU6-109P-201ENST00000516364 107 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 RNU6-184P-201ENST00000516514 107 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 DEFB131E-201ENST00000532329 154 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 AC026271.5-201ENST00000577873 130 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 AL162274.2-201ENST00000614406 332 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 AC022149.2-201ENST00000621061 203 ntBASIC4.33□□□□□ -1.72
NKX1-1Q15270 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX1-1Q15270 AC245060.5-201ENST00000610778 3293 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
NKX1-1Q15270 SNORA44-201ENST00000384584 132 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 RNU6-938P-201ENST00000411285 103 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.32□□□□□ -1.72
NKX1-1Q15270 RN7SL93P-201ENST00000463035 293 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 RNU6-762P-201ENST00000517107 102 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 AP006437.1-201ENST00000641440 3685 ntBASIC4.32□□□□□ -1.72
NKX1-1Q15270 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NKX1-1Q15270 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NKX1-1Q15270 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NKX1-1Q15270 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX1-1Q15270 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
NKX1-1Q15270 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX1-1Q15270 MIR422A-201ENST00000362286 90 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 Y_RNA.500-201ENST00000384466 111 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU6-816P-201ENST00000390914 107 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU6-1268P-201ENST00000391214 107 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU6-1239P-201ENST00000391310 107 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU6-893P-201ENST00000458841 100 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU7-96P-201ENST00000459535 64 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RPL23AP94-201ENST00000512518 302 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 RNU7-6P-201ENST00000516845 62 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 AP003327.1-201ENST00000529684 127 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 AC027279.3-201ENST00000625055 122 ntBASIC4.31□□□□□ -1.72
NKX1-1Q15270 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
NKX1-1Q15270 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX1-1Q15270 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX1-1Q15270 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX1-1Q15270 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 MAPK10-373ENST00000641983 6772 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 RNU1-18P-201ENST00000363062 164 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 RNU6-23P-201ENST00000363283 107 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 RNA5SP493-201ENST00000364115 91 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 MIR488-201ENST00000365739 83 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 Y_RNA.388-201ENST00000383919 113 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 MIR450A2-201ENST00000385022 100 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 AL022718.1-201ENST00000412004 84 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 AC069257.2-201ENST00000441819 155 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 MALAT1.1-201ENST00000618249 95 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 MIR4727-201ENST00000622232 55 ntBASIC4.3□□□□□ -1.72
NKX1-1Q15270 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX1-1Q15270 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX1-1Q15270 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NKX1-1Q15270 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX1-1Q15270 RNU1-70P-201ENST00000362618 164 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 Y_RNA.299-201ENST00000364973 94 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 SNORA27-201ENST00000384323 126 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 RNU6-163P-201ENST00000384396 106 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 MT-TI-201ENST00000387365 69 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX1-1Q15270 UBE2DNL-203ENST00000474922 222 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 MIR2682-201ENST00000580305 110 ntBASIC4.29□□□□□ -1.72
NKX1-1Q15270 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX1-1Q15270 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX1-1Q15270 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX1-1Q15270 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX1-1Q15270 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX1-1Q15270 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX1-1Q15270 SNORA7.4-201ENST00000384249 137 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 RNU6-950P-201ENST00000384651 107 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 AC107297.1-201ENST00000459991 176 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 RN7SL863P-201ENST00000462370 296 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 SCARNA23-201ENST00000516060 130 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX1-1Q15270 AC006386.2-201ENST00000624491 75 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 AC012005.1-201ENST00000624575 75 ntBASIC4.28□□□□□ -1.72
NKX1-1Q15270 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX1-1Q15270 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX1-1Q15270 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX1-1Q15270 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC4.27□□□□□ -1.73
NKX1-1Q15270 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX1-1Q15270 MIR448-201ENST00000362131 111 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 RNU6-461P-201ENST00000364195 107 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 RNU6-1104P-201ENST00000384723 104 ntBASIC4.27□□□□□ -1.73
NKX1-1Q15270 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms