Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
CDK3Q00526 AC015688.6-201ENST00000577737 104 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 MIR3145-201ENST00000580727 82 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 MIR4285-201ENST00000581001 85 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 MIR4300-201ENST00000581016 96 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 SNORD113-5-201ENST00000607261 78 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 AC004832.4-201ENST00000608952 331 ntBASIC1.5□□□□□ -2.17
CDK3Q00526 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
CDK3Q00526 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CDK3Q00526 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDK3Q00526 RNU6-1123P-201ENST00000362347 106 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 SNORD113-8-201ENST00000363497 74 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 Y_RNA.286-201ENST00000364813 102 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 SNORA33.2-201ENST00000365413 134 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 MIR513A1-201ENST00000385138 129 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 Y_RNA.602-201ENST00000410535 92 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 Y_RNA.621-201ENST00000411065 96 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 BTF3P4-201ENST00000418852 495 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 AC024067.1-201ENST00000426199 223 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 POLR2KP2-201ENST00000438155 177 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 PGBD4P5-201ENST00000445958 426 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 AL049830.1-201ENST00000468034 425 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 SNORA40.15-201ENST00000516884 107 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 AC113195.1-201ENST00000579952 141 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 AC073349.3-201ENST00000617616 186 ntBASIC1.49□□□□□ -2.17
CDK3Q00526 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CDK3Q00526 MIR302D-201ENST00000362275 68 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 SNORD1A-201ENST00000364968 72 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 RNA5SP259-201ENST00000365541 109 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 Y_RNA.383-201ENST00000383855 97 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
CDK3Q00526 RPS20P10-201ENST00000451209 253 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AC079140.2-201ENST00000506193 142 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 RNU7-28P-201ENST00000516759 62 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 RNU6-1137P-201ENST00000517073 99 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AC019176.1-201ENST00000518519 225 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 SUMO2P16-201ENST00000519475 264 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AC131281.1-201ENST00000522984 164 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.48□□□□□ -2.17
CDK3Q00526 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CDK3Q00526 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.48□□□□□ -2.17
CDK3Q00526 MIR4422-201ENST00000581938 83 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 AL513423.1-201ENST00000621695 132 ntBASIC1.48□□□□□ -2.17
CDK3Q00526 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDK3Q00526 Y_RNA.341-201ENST00000365341 102 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 RNU6-639P-201ENST00000384074 107 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 SNORD115-46-201ENST00000390982 71 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 RNU1-78P-201ENST00000391248 165 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 RNA5SP482-201ENST00000391269 118 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 AL590004.1-201ENST00000405321 300 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 AP1B1P2-201ENST00000416196 106 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 AL358944.1-201ENST00000528537 144 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 DNAJC19P9-201ENST00000555084 351 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 AL355297.3-201ENST00000604082 446 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 AC005972.2-201ENST00000604690 348 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CDK3Q00526 SNORD3E-202ENST00000627253 216 ntBASIC1.47□□□□□ -2.17
CDK3Q00526 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.47□□□□□ -2.17
CDK3Q00526 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CDK3Q00526 Y_RNA.210-201ENST00000364161 110 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 RNU6-1080P-201ENST00000383982 107 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 RNU6-102P-201ENST00000384485 104 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 CALM2P4-201ENST00000430810 426 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 OR9P1P-201ENST00000496431 281 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 RNA5SP168-201ENST00000516642 112 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 AC022140.2-201ENST00000623500 188 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 AC068647.2-201ENST00000637380 353 ntBASIC1.46□□□□□ -2.18
CDK3Q00526 Y_RNA.105-201ENST00000363182 111 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 Y_RNA.152-201ENST00000363578 100 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 RNU4-41P-201ENST00000364426 143 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 Y_RNA.456-201ENST00000384232 111 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 MIR660-201ENST00000385235 97 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 U8.16-201ENST00000391279 133 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.45□□□□□ -2.18
CDK3Q00526 ELOCP20-201ENST00000422460 345 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 HMGN1P10-201ENST00000474557 553 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.45□□□□□ -2.18
CDK3Q00526 RNA5SP445-201ENST00000515889 115 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 RNY3P15-201ENST00000516297 97 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 RNU6-764P-201ENST00000516396 105 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 AP003072.1-201ENST00000531740 145 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.45□□□□□ -2.18
CDK3Q00526 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.45□□□□□ -2.18
CDK3Q00526 MIR4778-201ENST00000577635 80 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 MIR3937-201ENST00000580135 106 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 snoU13.31-201ENST00000607291 104 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.45□□□□□ -2.18
CDK3Q00526 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.45□□□□□ -2.18
CDK3Q00526 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDK3Q00526 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CDK3Q00526 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CDK3Q00526 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms