Protein–RNA interactions for Protein: P78367

NKX3-2, Homeobox protein Nkx-3.2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2P78367 RPS12P2-201ENST00000439728 269 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX3-2P78367 RNU6-1333P-201ENST00000516162 93 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 RNU6-991P-201ENST00000516168 107 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 AL049861.1-201ENST00000603130 150 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 AC103810.6-201ENST00000606708 136 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 AL161431.1-201ENST00000618966 4205 ntBASIC2.78□□□□□ -1.96
NKX3-2P78367 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
NKX3-2P78367 MIR340-201ENST00000362125 95 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 Y_RNA.127-201ENST00000363386 109 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RNU6-1082P-201ENST00000364574 107 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RNA5SP205-201ENST00000364653 136 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RNU6-1336P-201ENST00000383886 109 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 SNORA72-201ENST00000384339 132 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RNA5SP496-201ENST00000391240 109 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AL512604.1-201ENST00000404812 257 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 SNORD88.1-201ENST00000408684 91 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RPS4XP11-201ENST00000446897 772 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC234781.5-201ENST00000508429 271 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC023141.11-201ENST00000508864 202 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC093259.1-201ENST00000509755 300 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.77□□□□□ -1.97
NKX3-2P78367 AC097462.1-201ENST00000514125 324 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 RNU2-34P-201ENST00000516534 121 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX3-2P78367 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 MIR3646-201ENST00000578301 84 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 MIR4438-201ENST00000585271 93 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 AC120024.3-201ENST00000603167 156 ntBASIC2.77□□□□□ -1.97
NKX3-2P78367 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX3-2P78367 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
NKX3-2P78367 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.77□□□□□ -1.97
NKX3-2P78367 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NKX3-2P78367 Y_RNA.81-201ENST00000362997 102 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 SNORD116-14-201ENST00000383894 92 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 SNORD116-17-201ENST00000383929 92 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 SNORD116-15-201ENST00000384445 92 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 SNORD116-19-201ENST00000384729 92 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 CKS1BP2-201ENST00000497342 240 ntBASIC2.76□□□□□ -1.97
NKX3-2P78367 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.76□□□□□ -1.97
NKX3-2P78367 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.76□□□□□ -1.97
NKX3-2P78367 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
NKX3-2P78367 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NKX3-2P78367 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NKX3-2P78367 Y_RNA.251-201ENST00000364551 99 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 Y_RNA.332-201ENST00000365271 113 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 RNU6-484P-201ENST00000384016 107 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 AL590004.2-201ENST00000404787 371 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 Y_RNA.629-201ENST00000411368 105 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 AC123900.1-201ENST00000420390 96 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 AL357134.1-201ENST00000445848 426 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 RNU7-172P-201ENST00000517125 64 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.75□□□□□ -1.97
NKX3-2P78367 MIR378D2-201ENST00000580636 98 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 MIR4524B-201ENST00000581569 115 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 AC011603.4-201ENST00000611325 277 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 U2.20-201ENST00000613956 192 ntBASIC2.75□□□□□ -1.97
NKX3-2P78367 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
NKX3-2P78367 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
NKX3-2P78367 MIR539-201ENST00000365690 78 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 SNORD20-201ENST00000384550 80 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 SNORA75.5-201ENST00000391291 81 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AC007064.1-201ENST00000412238 351 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX3-2P78367 AC060773.1-201ENST00000421698 310 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AC010154.1-201ENST00000425857 269 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AC092427.1-202ENST00000430569 476 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AC245102.2-201ENST00000448956 180 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 snoU13.23-201ENST00000458863 104 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 RNU2-56P-201ENST00000516826 190 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 RPL23AP91-201ENST00000569211 455 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 TUG1_4.1-201ENST00000619464 181 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 MIR1291-201ENST00000627649 87 ntBASIC2.74□□□□□ -1.97
NKX3-2P78367 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.74□□□□□ -1.97
NKX3-2P78367 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.74□□□□□ -1.97
NKX3-2P78367 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX3-2P78367 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
NKX3-2P78367 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX3-2P78367 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
NKX3-2P78367 Y_RNA.203-201ENST00000364106 102 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 AC003685.2-201ENST00000422795 395 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 CYP2C59P-201ENST00000457790 269 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 RNU6-197P-201ENST00000516680 100 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 RNU6-856P-201ENST00000516959 98 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 SNORA48.11-201ENST00000517015 89 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 MIR4769-201ENST00000584126 77 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 AL356280.1-201ENST00000603614 379 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.73□□□□□ -1.97
NKX3-2P78367 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NKX3-2P78367 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.72□□□□□ -1.97
NKX3-2P78367 RNU6-597P-201ENST00000365620 102 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 Y_RNA.432-201ENST00000384087 111 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 SNORA79-201ENST00000408376 140 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 SNORA4.4-201ENST00000515921 135 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 AP001328.1-201ENST00000528550 176 ntBASIC2.72□□□□□ -1.97
NKX3-2P78367 AC011604.1-201ENST00000545978 196 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms