Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-117P-201ENST00000365415 107 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNY1P5-201ENST00000383890 115 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU6-417P-201ENST00000384712 107 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU6-1186P-201ENST00000410429 97 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 AL121914.1-201ENST00000450188 156 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU7-26P-201ENST00000458980 63 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU6-437P-201ENST00000459408 95 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU6-1041P-201ENST00000516254 102 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 AC067747.1-201ENST00000608026 250 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 U2.20-201ENST00000613956 192 ntBASIC2.69□□□□□ -1.98
HERVK_113P62684 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HERVK_113P62684 RNU4-84P-201ENST00000364200 139 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 RNU4-41P-201ENST00000364426 143 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 AL606845.1-201ENST00000404881 255 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 AL162725.1-201ENST00000435405 301 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 AC011406.1-201ENST00000512440 370 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 RNU6-1146P-201ENST00000516282 102 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 MIR5688-201ENST00000580619 83 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 AL391903.3-201ENST00000612158 163 ntBASIC2.68□□□□□ -1.98
HERVK_113P62684 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HERVK_113P62684 ZNF271P-202ENST00000465539 1970 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 MIR21-201ENST00000362134 72 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 SRIP3-201ENST00000413200 219 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 AC005840.1-201ENST00000498412 377 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 AC108210.2-201ENST00000503681 201 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.67□□□□□ -1.98
HERVK_113P62684 MIR4431-201ENST00000579990 94 ntBASIC2.67□□□□□ -1.98
HERVK_113P62684 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.66□□□□□ -1.98
HERVK_113P62684 RNU6-239P-201ENST00000390990 99 ntBASIC2.66□□□□□ -1.98
HERVK_113P62684 Y_RNA.580-201ENST00000391004 95 ntBASIC2.66□□□□□ -1.98
HERVK_113P62684 MIR1278-201ENST00000408753 81 ntBASIC2.66□□□□□ -1.98
HERVK_113P62684 AC006461.1-201ENST00000412637 326 ntBASIC2.66□□□□□ -1.98
HERVK_113P62684 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.66□□□□□ -1.98
HERVK_113P62684 U6.73-201ENST00000619194 103 ntBASIC2.66□□□□□ -1.98
HERVK_113P62684 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERVK_113P62684 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HERVK_113P62684 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HERVK_113P62684 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
HERVK_113P62684 snoU2-30.2-201ENST00000362805 70 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 Y_RNA.99-201ENST00000363138 105 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 RNU6-151P-201ENST00000364158 107 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 RNU1-51P-201ENST00000365345 176 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 SNORA72-201ENST00000384339 132 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 MIR15B-201ENST00000385045 98 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 MIR613-201ENST00000385248 95 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 RNU6-1228P-201ENST00000391014 107 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 AC018634.1-201ENST00000437554 401 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 TMSB4XP3-201ENST00000445144 114 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 AC107027.2-201ENST00000512197 115 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 RNU6-561P-201ENST00000516222 102 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 AL929325.1-201ENST00000603096 117 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 AC073413.2-201ENST00000604332 360 ntBASIC2.65□□□□□ -1.99
HERVK_113P62684 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HERVK_113P62684 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
HERVK_113P62684 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
HERVK_113P62684 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HERVK_113P62684 AP006437.1-201ENST00000641440 3685 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 SNORD115-3-201ENST00000363100 82 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 SNORD114-6-201ENST00000364393 72 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 RNU6-728P-201ENST00000365375 104 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 MIR1262-201ENST00000408276 93 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 Y_RNA.621-201ENST00000411065 96 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 Y_RNA.622-201ENST00000411091 108 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 RPS15AP28-201ENST00000435088 386 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 RPS4XP11-201ENST00000446897 772 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 NDUFA5P6-201ENST00000542110 379 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.64□□□□□ -1.99
HERVK_113P62684 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 U4atac.1-201ENST00000618345 95 ntBASIC2.64□□□□□ -1.99
HERVK_113P62684 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HERVK_113P62684 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 RNU6-160P-201ENST00000384591 107 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 SNORA64-201ENST00000384674 134 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 Y_RNA.587-201ENST00000391210 103 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 RNA5SP467-201ENST00000391274 118 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 AL512604.1-201ENST00000404812 257 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 HMGN2P35-201ENST00000412164 270 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 EDDM3CP-201ENST00000415977 425 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 SNORD116-25-201ENST00000516517 92 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 AC011604.1-201ENST00000545978 196 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 AC007229.1-201ENST00000590455 412 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 AL031274.2-201ENST00000599419 203 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.63□□□□□ -1.99
HERVK_113P62684 AC132825.6-201ENST00000638861 357 ntBASIC2.63□□□□□ -1.99
HERVK_113P62684 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HERVK_113P62684 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HERVK_113P62684 RNU6-674P-201ENST00000363831 107 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 RNU6-704P-201ENST00000364162 103 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 Y_RNA.343-201ENST00000365354 112 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 Y_RNA.400-201ENST00000383963 111 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 Y_RNA.488-201ENST00000384403 102 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.62□□□□□ -1.99
HERVK_113P62684 RNU6-1096P-201ENST00000517089 102 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 AL049861.1-201ENST00000603130 150 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 AP001485.1-201ENST00000604799 199 ntBASIC2.62□□□□□ -1.99
HERVK_113P62684 Y_RNA.778-201ENST00000620203 90 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 1273.6 ms