Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 MT-TW-201ENST00000387382 68 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
RIPK4P57078 RNU6-360P-201ENST00000390944 104 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 snosnR66.1-201ENST00000391095 99 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 NDUFB4P10-201ENST00000452541 359 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 RNU6-221P-201ENST00000459541 99 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 RNU2-12P-201ENST00000517216 168 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 AC025647.1-201ENST00000517879 253 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 MIR4753-201ENST00000585119 83 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 Y_RNA.772-201ENST00000606692 102 ntBASIC1.37□□□□□ -2.19
RIPK4P57078 AC010615.1-201ENST00000594254 1764 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 Y_RNA.16-201ENST00000362421 102 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 RNU6-862P-201ENST00000362804 105 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 SNORA33-201ENST00000363664 130 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 RNU6-1175P-201ENST00000365200 107 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 SNORA63.7-201ENST00000365579 123 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 RNU6-1264P-201ENST00000383891 107 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 Y_RNA.446-201ENST00000384178 104 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 SNORD63-201ENST00000384262 68 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 RNU6-472P-201ENST00000384299 107 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 Y_RNA.526-201ENST00000384572 110 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 CST2P1-201ENST00000425770 87 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AC245517.4-201ENST00000448601 281 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 HSPE1P25-201ENST00000455484 251 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 SNORD65B-201ENST00000459126 73 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AC005908.1-201ENST00000468701 347 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AC011406.1-201ENST00000512440 370 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 RNU6-948P-201ENST00000516374 107 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 CYCSP23-201ENST00000519781 313 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.36□□□□□ -2.19
RIPK4P57078 SNORA77B-201ENST00000578179 125 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AC005176.2-201ENST00000596933 147 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 AC022441.3-201ENST00000605737 136 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 snoZ196.1-201ENST00000625269 89 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 U6.115-201ENST00000636045 103 ntBASIC1.36□□□□□ -2.19
RIPK4P57078 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RIPK4P57078 Y_RNA.122-201ENST00000363331 96 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 SNORD113-8-201ENST00000363497 74 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.172-201ENST00000363765 102 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNU5F-3P-201ENST00000363767 117 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.243-201ENST00000364481 109 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.276-201ENST00000364732 109 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.287-201ENST00000364853 94 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.376-201ENST00000365638 108 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.396-201ENST00000383949 103 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.541-201ENST00000384640 113 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.574-201ENST00000384766 95 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RIPK4P57078 Y_RNA.602-201ENST00000410535 92 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNA5SP475-201ENST00000410568 110 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 MTND3P2-201ENST00000438452 342 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 AL731563.1-201ENST00000442202 214 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 AC114982.1-201ENST00000469402 321 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNU6-496P-201ENST00000516145 99 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNU6-436P-201ENST00000516171 114 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 RNU6-1041P-201ENST00000516254 102 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 AP003733.2-201ENST00000529409 171 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 MIR4503-201ENST00000582187 83 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 AL162730.1-201ENST00000605734 292 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 MIR376A1-201ENST00000616574 68 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 AC006001.4-201ENST00000622243 395 ntBASIC1.35□□□□□ -2.19
RIPK4P57078 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RIPK4P57078 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.19
RIPK4P57078 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RIPK4P57078 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RIPK4P57078 Y_RNA.84-201ENST00000363011 104 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 Y_RNA.124-201ENST00000363339 93 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 SNORD115-30-201ENST00000364117 82 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNU1-96P-201ENST00000364163 162 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 SNORA20B-201ENST00000384220 132 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 Y_RNA.462-201ENST00000384268 102 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 Y_RNA.483-201ENST00000384380 101 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 MIR499A-201ENST00000384903 122 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 MIR513A1-201ENST00000385138 129 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNU2-54P-201ENST00000410299 190 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 EBAG9P1-201ENST00000418955 543 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 FTH1P12-201ENST00000432137 551 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 AC069257.2-201ENST00000441819 155 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 MTCO2P24-201ENST00000515611 426 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNA5SP481-201ENST00000516814 122 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNU6-570P-201ENST00000517051 105 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNA5SP437-201ENST00000517249 129 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 AC027419.1-201ENST00000522976 328 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.34□□□□□ -2.19
RIPK4P57078 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.34□□□□□ -2.19
RIPK4P57078 MIR3145-201ENST00000580727 82 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 AC005828.6-201ENST00000606610 232 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.19
RIPK4P57078 RNU6-1080P-201ENST00000383982 107 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
RIPK4P57078 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 RNA5SP467-201ENST00000391274 118 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.33□□□□□ -2.2
RIPK4P57078 TOMM22P2-201ENST00000430735 237 ntBASIC1.33□□□□□ -2.2
RIPK4P57078 MTCYBP9-201ENST00000431021 303 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms