Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL442067.1-201ENST00000613261 223 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
SUMO3P55854 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SUMO3P55854 RNU4-82P-201ENST00000362443 140 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 RNY1-201ENST00000364228 113 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 Y_RNA.269-201ENST00000364685 89 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 SNORA4.2-201ENST00000365313 147 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 Y_RNA.621-201ENST00000411065 96 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.06□□□□□ -2.08
SUMO3P55854 snoU13.27-201ENST00000459278 104 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 RNU6-437P-201ENST00000459408 95 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 SNORA31.10-201ENST00000516482 106 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 RNA5SP281-201ENST00000516504 135 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 SNORA31.11-201ENST00000516528 139 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 MIR4299-201ENST00000577899 72 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 AC005357.1-201ENST00000588399 301 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 SNORA28-201ENST00000606769 126 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 AC009831.4-201ENST00000620744 325 ntBASIC2.06□□□□□ -2.08
SUMO3P55854 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SUMO3P55854 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.06□□□□□ -2.08
SUMO3P55854 RNA5SP289-201ENST00000362332 137 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 Y_RNA.292-201ENST00000364904 97 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 RNU6-1080P-201ENST00000383982 107 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 Y_RNA.500-201ENST00000384466 111 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 AL356379.1-201ENST00000414105 126 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 COX6CP10-201ENST00000416832 224 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 AL356320.1-201ENST00000429616 163 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 RNA5SP233-201ENST00000459153 113 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 UBE2DNL-203ENST00000474922 222 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 RNA5SP402-201ENST00000517148 110 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 AL929325.1-201ENST00000603096 117 ntBASIC2.05□□□□□ -2.08
SUMO3P55854 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SUMO3P55854 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SUMO3P55854 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SUMO3P55854 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 Y_RNA.203-201ENST00000364106 102 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 Y_RNA.265-201ENST00000364677 108 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 Y_RNA.293-201ENST00000364908 93 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 Y_RNA.304-201ENST00000365011 112 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 RNA5SP482-201ENST00000391269 118 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SUMO3P55854 FTH1P12-201ENST00000432137 551 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.04□□□□□ -2.08
SUMO3P55854 COX6CP14-201ENST00000469580 174 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 AC091544.4-201ENST00000555268 342 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 MIR2681-201ENST00000581814 105 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 AC011921.3-201ENST00000605540 361 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 AC141273.2-201ENST00000618989 130 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.04□□□□□ -2.08
SUMO3P55854 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SUMO3P55854 RNY4P28-201ENST00000365281 93 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 Y_RNA.552-201ENST00000384665 112 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 RNU6-1031P-201ENST00000384773 107 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 MIR526A2-201ENST00000390198 65 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.03□□□□□ -2.08
SUMO3P55854 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.03□□□□□ -2.08
SUMO3P55854 SNORD116-28-201ENST00000516123 91 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.03□□□□□ -2.08
SUMO3P55854 MIR4709-201ENST00000577272 72 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 AL627230.6-201ENST00000611129 280 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 AL137847.3-201ENST00000611521 109 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 AL365265.1-201ENST00000621045 234 ntBASIC2.03□□□□□ -2.08
SUMO3P55854 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SUMO3P55854 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SUMO3P55854 MIR449A-201ENST00000362113 91 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 SNORA8.3-201ENST00000384679 139 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 MIR221-201ENST00000385135 110 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.02□□□□□ -2.09
SUMO3P55854 HMGN1P7-201ENST00000491722 313 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.02□□□□□ -2.09
SUMO3P55854 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.02□□□□□ -2.09
SUMO3P55854 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.02□□□□□ -2.09
SUMO3P55854 MIR4724-201ENST00000579485 89 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 Y_RNA.802-201ENST00000614892 130 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 AC068700.1-201ENST00000565862 3754 ntBASIC2.02□□□□□ -2.09
SUMO3P55854 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
SUMO3P55854 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SUMO3P55854 RNU6-661P-201ENST00000362409 107 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 RNU4-41P-201ENST00000364426 143 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 Y_RNA.262-201ENST00000364641 102 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.01□□□□□ -2.09
SUMO3P55854 Z98949.2-201ENST00000440996 144 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.01□□□□□ -2.09
SUMO3P55854 RNU6-388P-201ENST00000517012 105 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 RNU6-389P-201ENST00000517048 105 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 SNORD53-201ENST00000579969 78 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 MIR3671-201ENST00000580455 88 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 AL590808.1-201ENST00000618696 141 ntBASIC2.01□□□□□ -2.09
SUMO3P55854 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SUMO3P55854 AC092881.1-201ENST00000638218 2733 ntBASIC2□□□□□ -2.09
SUMO3P55854 MIR367-201ENST00000362299 68 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms