Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.13□□□□□ -2.07
TTC3P53804 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.13□□□□□ -2.07
TTC3P53804 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.13□□□□□ -2.07
TTC3P53804 MIR3616-201ENST00000584070 92 ntBASIC2.13□□□□□ -2.07
TTC3P53804 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
TTC3P53804 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TTC3P53804 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TTC3P53804 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TTC3P53804 RNU1-72P-201ENST00000362976 153 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-486P-201ENST00000363116 107 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNY3P5-201ENST00000384127 102 ntBASIC2.12□□□□□ -2.07
TTC3P53804 MIR513C-201ENST00000401352 84 ntBASIC2.12□□□□□ -2.07
TTC3P53804 SNORA36B-201ENST00000410438 131 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-57P-201ENST00000411348 103 ntBASIC2.12□□□□□ -2.07
TTC3P53804 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-437P-201ENST00000459408 95 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNA5SP20-201ENST00000515976 84 ntBASIC2.12□□□□□ -2.07
TTC3P53804 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC3P53804 AC112693.2-201ENST00000556538 232 ntBASIC2.12□□□□□ -2.07
TTC3P53804 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TTC3P53804 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
TTC3P53804 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
TTC3P53804 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.12□□□□□ -2.07
TTC3P53804 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TTC3P53804 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TTC3P53804 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TTC3P53804 Y_RNA.124-201ENST00000363339 93 ntBASIC2.12□□□□□ -2.07
TTC3P53804 SNORD116-18-201ENST00000383961 92 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-804P-201ENST00000384286 107 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6-239P-201ENST00000390990 99 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU2-48P-201ENST00000410694 191 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RPL30P13-201ENST00000418873 348 ntBASIC2.12□□□□□ -2.07
TTC3P53804 AL162725.1-201ENST00000435405 301 ntBASIC2.12□□□□□ -2.07
TTC3P53804 HSPE1P21-201ENST00000438283 308 ntBASIC2.12□□□□□ -2.07
TTC3P53804 AC016717.1-201ENST00000448918 286 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RPL36AP21-201ENST00000490372 323 ntBASIC2.12□□□□□ -2.07
TTC3P53804 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.12□□□□□ -2.07
TTC3P53804 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC3P53804 MIR3684-201ENST00000579779 74 ntBASIC2.12□□□□□ -2.07
TTC3P53804 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
TTC3P53804 RNU6-1130P-201ENST00000365434 107 ntBASIC2.11□□□□□ -2.07
TTC3P53804 Y_RNA.357-201ENST00000365487 109 ntBASIC2.11□□□□□ -2.07
TTC3P53804 RNU6-1168P-201ENST00000390831 104 ntBASIC2.11□□□□□ -2.07
TTC3P53804 RNU2-55P-201ENST00000411146 174 ntBASIC2.11□□□□□ -2.07
TTC3P53804 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
TTC3P53804 AC010531.2-201ENST00000465012 153 ntBASIC2.11□□□□□ -2.07
TTC3P53804 RPS27P22-201ENST00000478056 241 ntBASIC2.11□□□□□ -2.07
TTC3P53804 ATP5EP1-201ENST00000510257 156 ntBASIC2.11□□□□□ -2.07
TTC3P53804 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
TTC3P53804 Pinc.1-201ENST00000616452 154 ntBASIC2.11□□□□□ -2.07
TTC3P53804 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.11□□□□□ -2.07
TTC3P53804 RNU6-818P-201ENST00000364837 108 ntBASIC2.1□□□□□ -2.07
TTC3P53804 RNA5SP125-201ENST00000364843 120 ntBASIC2.1□□□□□ -2.07
TTC3P53804 RNU6-1264P-201ENST00000383891 107 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AL606845.1-201ENST00000404881 255 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AC108667.1-201ENST00000428618 249 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AC011753.1-201ENST00000451001 220 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AC117454.1-201ENST00000491120 168 ntBASIC2.1□□□□□ -2.07
TTC3P53804 Y_RNA.797-201ENST00000515977 94 ntBASIC2.1□□□□□ -2.07
TTC3P53804 RNA5SP182-201ENST00000516064 82 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.1□□□□□ -2.07
TTC3P53804 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
TTC3P53804 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
TTC3P53804 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
TTC3P53804 RNU6-674P-201ENST00000363831 107 ntBASIC2.1□□□□□ -2.07
TTC3P53804 Y_RNA.293-201ENST00000364908 93 ntBASIC2.1□□□□□ -2.07
TTC3P53804 U8.7-201ENST00000364940 136 ntBASIC2.1□□□□□ -2.07
TTC3P53804 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TTC3P53804 SUMO1P4-201ENST00000429430 302 ntBASIC2.1□□□□□ -2.07
TTC3P53804 TMSB4XP3-201ENST00000445144 114 ntBASIC2.1□□□□□ -2.07
TTC3P53804 AC245047.8-201ENST00000456455 284 ntBASIC2.1□□□□□ -2.07
TTC3P53804 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.1□□□□□ -2.07
TTC3P53804 RNU6-346P-201ENST00000516288 111 ntBASIC2.1□□□□□ -2.07
TTC3P53804 MIR4498-201ENST00000577599 66 ntBASIC2.1□□□□□ -2.07
TTC3P53804 Y_RNA.778-201ENST00000620203 90 ntBASIC2.1□□□□□ -2.07
TTC3P53804 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TTC3P53804 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
TTC3P53804 SNORA20B-201ENST00000384220 132 ntBASIC2.09□□□□□ -2.07
TTC3P53804 MIR616-201ENST00000385293 97 ntBASIC2.09□□□□□ -2.07
TTC3P53804 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.07
TTC3P53804 RNU6-383P-201ENST00000410864 94 ntBASIC2.09□□□□□ -2.07
TTC3P53804 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.09□□□□□ -2.07
TTC3P53804 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.09□□□□□ -2.07
TTC3P53804 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.09□□□□□ -2.07
TTC3P53804 MIR3646-201ENST00000578301 84 ntBASIC2.09□□□□□ -2.07
TTC3P53804 MIR4446-201ENST00000578505 67 ntBASIC2.09□□□□□ -2.07
TTC3P53804 MIR4438-201ENST00000585271 93 ntBASIC2.09□□□□□ -2.07
TTC3P53804 DEFB117-201ENST00000602356 141 ntBASIC2.09□□□□□ -2.07
TTC3P53804 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
TTC3P53804 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.09□□□□□ -2.07
TTC3P53804 Y_RNA.182-201ENST00000363880 111 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-1117P-201ENST00000384525 104 ntBASIC2.08□□□□□ -2.08
TTC3P53804 MIR561-201ENST00000385216 97 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-220P-201ENST00000390919 107 ntBASIC2.08□□□□□ -2.08
TTC3P53804 SNORA79-201ENST00000408376 140 ntBASIC2.08□□□□□ -2.08
TTC3P53804 Y_RNA.629-201ENST00000411368 105 ntBASIC2.08□□□□□ -2.08
TTC3P53804 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
TTC3P53804 RNU7-116P-201ENST00000516940 62 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms