Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SNORD115-28-201ENST00000363931 81 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 MIR522-201ENST00000385071 87 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 RPL39P25-201ENST00000449384 154 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 CKS1BP2-201ENST00000497342 240 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 SCARNA3-201ENST00000517097 143 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 AC026421.1-201ENST00000519101 163 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 SUMO2P16-201ENST00000519475 264 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.23□□□□□ -1.73
PRIM1P49642 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.23□□□□□ -1.73
PRIM1P49642 DEFB131E-201ENST00000532329 154 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 DLEU2_5.2-201ENST00000610606 84 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 AL353149.1-201ENST00000610667 244 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PRIM1P49642 GABRG2-229ENST00000641017 3628 ntBASIC4.23□□□□□ -1.73
PRIM1P49642 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRIM1P49642 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.23□□□□□ -1.73
PRIM1P49642 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PRIM1P49642 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRIM1P49642 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRIM1P49642 AC091564.4-201ENST00000533934 2194 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 MIR30E-201ENST00000362104 92 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 RNU6-1134P-201ENST00000365156 101 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 RNY1P7-201ENST00000384743 110 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRIM1P49642 AC060773.1-201ENST00000421698 310 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 AL049830.1-201ENST00000468034 425 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.22□□□□□ -1.73
PRIM1P49642 SCARNA17.1-201ENST00000516211 143 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 SCARNA17.2-201ENST00000516334 143 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 MIR2682-201ENST00000580305 110 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 FAM71BP1-201ENST00000604431 523 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 SCARNA17.4-201ENST00000614296 143 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 UCA1.1-201ENST00000620952 75 ntBASIC4.22□□□□□ -1.73
PRIM1P49642 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRIM1P49642 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRIM1P49642 Y_RNA.267-201ENST00000364679 109 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 MIR95-201ENST00000385072 81 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AC244505.4-201ENST00000434905 287 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 SSXP5-201ENST00000443473 287 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AC087499.4-201ENST00000448505 178 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AC010401.1-201ENST00000463867 348 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 SCARNA23-201ENST00000516060 130 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AL590808.1-201ENST00000618696 141 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AC015726.2-201ENST00000620112 122 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 AC022149.2-201ENST00000621061 203 ntBASIC4.21□□□□□ -1.74
PRIM1P49642 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRIM1P49642 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRIM1P49642 Y_RNA.344-201ENST00000365381 112 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 SNORA7.4-201ENST00000384249 137 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 SNORD78.1-201ENST00000390866 65 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 SNORA48.8-201ENST00000391324 134 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 RNU7-128P-201ENST00000517247 62 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 MIR4305-201ENST00000583252 102 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 MIR376A2-201ENST00000636782 80 ntBASIC4.2□□□□□ -1.74
PRIM1P49642 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRIM1P49642 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRIM1P49642 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PRIM1P49642 Y_RNA.37-201ENST00000362606 108 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 SNORA14A-201ENST00000364773 135 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 Y_RNA.336-201ENST00000365307 109 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 SNORA70.19-201ENST00000516717 90 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 SNORA48.11-201ENST00000517015 89 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 AC024995.1-201ENST00000523014 93 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.19□□□□□ -1.74
PRIM1P49642 MIR4762-201ENST00000585261 75 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 AL356280.1-201ENST00000603614 379 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.19□□□□□ -1.74
PRIM1P49642 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
PRIM1P49642 Y_RNA.96-201ENST00000363092 109 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 snoU2-30.1-201ENST00000365012 70 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 Y_RNA.342-201ENST00000365352 113 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 AL627390.1-201ENST00000396055 340 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.18□□□□□ -1.74
PRIM1P49642 AC009414.1-201ENST00000427200 443 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 PGBD4P5-201ENST00000445958 426 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 MIR4474-201ENST00000579189 78 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.18□□□□□ -1.74
PRIM1P49642 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.18□□□□□ -1.74
PRIM1P49642 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PRIM1P49642 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PRIM1P49642 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PRIM1P49642 U8.5-201ENST00000364528 136 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 SNORA54-201ENST00000384281 123 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 Y_RNA.466-201ENST00000384294 113 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 Y_RNA.507-201ENST00000384500 99 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 FO393413.1-201ENST00000402892 195 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 Y_RNA.601-201ENST00000410500 113 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 SNORA19.1-201ENST00000410656 129 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 AL445646.1-201ENST00000431784 216 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.17□□□□□ -1.74
PRIM1P49642 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.17□□□□□ -1.74
PRIM1P49642 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PRIM1P49642 RNU6-573P-201ENST00000383938 106 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 Y_RNA.440-201ENST00000384120 114 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 RNU6-816P-201ENST00000390914 107 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 RNA5SP323-201ENST00000391094 133 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 RNU6-1268P-201ENST00000391214 107 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 RNU6-1239P-201ENST00000391310 107 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 RNU7-123P-201ENST00000515911 60 ntBASIC4.16□□□□□ -1.74
PRIM1P49642 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms