Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 SNORA4.2-201ENST00000365313 147 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 Y_RNA.389-201ENST00000383924 113 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU6-1227P-201ENST00000383981 107 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU6-505P-201ENST00000384427 107 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 MIR520G-201ENST00000385064 90 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU6-440P-201ENST00000390882 105 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 MIR1276-201ENST00000408707 83 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU6-710P-201ENST00000410424 105 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 AL606517.2-201ENST00000442855 241 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 RNU7-28P-201ENST00000516759 62 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 Y_RNA.715-201ENST00000517082 110 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 AL358944.1-201ENST00000528537 144 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 SNORA28-201ENST00000606769 126 ntBASIC1.4□□□□□ -2.18
NEDD4P46934 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.4□□□□□ -2.18
NEDD4P46934 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
NEDD4P46934 Y_RNA.143-201ENST00000363520 106 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 Y_RNA.183-201ENST00000363882 113 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 Y_RNA.508-201ENST00000384502 114 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 RNU6-1031P-201ENST00000384773 107 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 AL034345.1-201ENST00000407768 123 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 RNU2-61P-201ENST00000411069 191 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 AC024067.1-201ENST00000426199 223 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 MTCYBP6-201ENST00000441810 138 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.4□□□□□ -2.19
NEDD4P46934 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.4□□□□□ -2.19
NEDD4P46934 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.4□□□□□ -2.19
NEDD4P46934 SEPT14P8-201ENST00000508026 178 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 SNORA31.10-201ENST00000516482 106 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 RNU7-110P-201ENST00000516891 62 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 AL929325.1-201ENST00000603096 117 ntBASIC1.4□□□□□ -2.19
NEDD4P46934 AC100821.1-201ENST00000523153 2479 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 MIR424-201ENST00000362227 98 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 Y_RNA.331-201ENST00000365267 102 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 MIR194-1-201ENST00000384892 85 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 AL161935.2-201ENST00000414627 60 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 RNU7-34P-201ENST00000459394 64 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 RNU6-1337P-201ENST00000516525 95 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 AP002004.2-201ENST00000531656 154 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 AC091178.2-201ENST00000584401 117 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 AL356055.1-201ENST00000602528 446 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 SNORD113-5-201ENST00000607261 78 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 AL021879.1-201ENST00000611756 288 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 PART1_1.1-201ENST00000611761 217 ntBASIC1.39□□□□□ -2.19
NEDD4P46934 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.39□□□□□ -2.19
NEDD4P46934 RNU6-1123P-201ENST00000362347 106 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 SNORD33-201ENST00000362761 85 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 Y_RNA.116-201ENST00000363292 103 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.38□□□□□ -2.19
NEDD4P46934 RNU6-937P-201ENST00000384325 106 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 RNU6-21P-201ENST00000384710 107 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 RNU6-130P-201ENST00000411112 103 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 AL162725.1-201ENST00000435405 301 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 PGBD4P5-201ENST00000445958 426 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 AC091021.1-201ENST00000468051 388 ntBASIC1.38□□□□□ -2.19
NEDD4P46934 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
NEDD4P46934 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
NEDD4P46934 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
NEDD4P46934 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NEDD4P46934 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.37□□□□□ -2.19
NEDD4P46934 Y_RNA.329-201ENST00000365209 107 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 Y_RNA.455-201ENST00000384230 98 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 RNU1-78P-201ENST00000391248 165 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 RNA5SP511-201ENST00000410487 115 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.37□□□□□ -2.19
NEDD4P46934 RNU6-966P-201ENST00000516479 104 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 RNU2-56P-201ENST00000516826 190 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
NEDD4P46934 ICE2P2-201ENST00000483823 2787 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 MIR126-201ENST00000362291 85 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 SNORD81.1-201ENST00000363064 77 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 Y_RNA.152-201ENST00000363578 100 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 Y_RNA.267-201ENST00000364679 109 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 RNU6-338P-201ENST00000383888 105 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 Y_RNA.422-201ENST00000384054 114 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 MIR518E-201ENST00000385252 88 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 RNU6-1096P-201ENST00000517089 102 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 RNU6-897P-201ENST00000517135 105 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.36□□□□□ -2.19
NEDD4P46934 AL355297.3-201ENST00000604082 446 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 AC016925.2-201ENST00000605108 242 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 AC021506.2-201ENST00000612354 169 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 MIR6504-201ENST00000613520 61 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 AC073349.3-201ENST00000617616 186 ntBASIC1.36□□□□□ -2.19
NEDD4P46934 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
NEDD4P46934 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.35□□□□□ -2.19
NEDD4P46934 Y_RNA.265-201ENST00000364677 108 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 Y_RNA.269-201ENST00000364685 89 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 Y_RNA.276-201ENST00000364732 109 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 SNORA33.2-201ENST00000365413 134 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 Y_RNA.355-201ENST00000365462 98 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 RNU6-639P-201ENST00000384074 107 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 RNU6-136P-201ENST00000384663 107 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 SNORD115-46-201ENST00000390982 71 ntBASIC1.35□□□□□ -2.19
NEDD4P46934 RNU6-1248P-201ENST00000391096 64 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 297.4 ms