Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MIR6873-201ENST00000622788 63 ntBASIC2.23□□□□□ -2.05
MMP13P45452 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
MMP13P45452 AC009487.4-201ENST00000624969 3585 ntBASIC2.23□□□□□ -2.05
MMP13P45452 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
MMP13P45452 SNORD114-7-201ENST00000362520 77 ntBASIC2.22□□□□□ -2.05
MMP13P45452 RNU6-103P-201ENST00000363686 107 ntBASIC2.22□□□□□ -2.05
MMP13P45452 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
MMP13P45452 RNU4-11P-201ENST00000365287 132 ntBASIC2.22□□□□□ -2.05
MMP13P45452 Y_RNA.357-201ENST00000365487 109 ntBASIC2.22□□□□□ -2.05
MMP13P45452 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AL606845.1-201ENST00000404881 255 ntBASIC2.22□□□□□ -2.05
MMP13P45452 RNA5SP511-201ENST00000410487 115 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AL135786.1-201ENST00000415892 214 ntBASIC2.22□□□□□ -2.05
MMP13P45452 CYCSP49-201ENST00000420810 319 ntBASIC2.22□□□□□ -2.05
MMP13P45452 HSPE1P21-201ENST00000438283 308 ntBASIC2.22□□□□□ -2.05
MMP13P45452 RNU7-197P-201ENST00000458836 62 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.22□□□□□ -2.05
MMP13P45452 RNA5SP20-201ENST00000515976 84 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.22□□□□□ -2.05
MMP13P45452 AP003357.1-201ENST00000604497 148 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AL365222.1-201ENST00000614661 98 ntBASIC2.22□□□□□ -2.05
MMP13P45452 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.22□□□□□ -2.05
MMP13P45452 AC064859.1-201ENST00000624741 174 ntBASIC2.22□□□□□ -2.05
MMP13P45452 RNU6-743P-201ENST00000364151 106 ntBASIC2.21□□□□□ -2.06
MMP13P45452 RNU1-148P-201ENST00000384472 162 ntBASIC2.21□□□□□ -2.06
MMP13P45452 MIR95-201ENST00000385072 81 ntBASIC2.21□□□□□ -2.06
MMP13P45452 HMGN2P38-201ENST00000423806 265 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.21□□□□□ -2.06
MMP13P45452 MTCO1P44-201ENST00000441935 243 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AC010409.1-201ENST00000487382 476 ntBASIC2.21□□□□□ -2.06
MMP13P45452 CKS1BP2-201ENST00000497342 240 ntBASIC2.21□□□□□ -2.06
MMP13P45452 SNORA70.12-201ENST00000516084 153 ntBASIC2.21□□□□□ -2.06
MMP13P45452 SNORA25.12-201ENST00000516202 82 ntBASIC2.21□□□□□ -2.06
MMP13P45452 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
MMP13P45452 AC015720.1-201ENST00000565251 277 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AC127455.1-201ENST00000565496 145 ntBASIC2.21□□□□□ -2.06
MMP13P45452 MIR4513-201ENST00000581077 86 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.21□□□□□ -2.06
MMP13P45452 AC013412.1-201ENST00000610687 192 ntBASIC2.21□□□□□ -2.06
MMP13P45452 AL391903.3-201ENST00000612158 163 ntBASIC2.21□□□□□ -2.06
MMP13P45452 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
MMP13P45452 Y_RNA.218-201ENST00000364218 104 ntBASIC2.2□□□□□ -2.06
MMP13P45452 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.2□□□□□ -2.06
MMP13P45452 RNU6-1323P-201ENST00000384025 107 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RNU6-22P-201ENST00000384355 107 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RNU6-136P-201ENST00000384663 107 ntBASIC2.2□□□□□ -2.06
MMP13P45452 SNORA3.2-201ENST00000408221 125 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
MMP13P45452 Z98742.3-201ENST00000418637 326 ntBASIC2.2□□□□□ -2.06
MMP13P45452 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.2□□□□□ -2.06
MMP13P45452 MTND4LP9-201ENST00000427694 174 ntBASIC2.2□□□□□ -2.06
MMP13P45452 AC010598.1-201ENST00000510378 103 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RPL23AP94-201ENST00000512518 302 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RNU1-40P-201ENST00000516816 164 ntBASIC2.2□□□□□ -2.06
MMP13P45452 RNU1-97P-201ENST00000516872 164 ntBASIC2.2□□□□□ -2.06
MMP13P45452 SNORA48.11-201ENST00000517015 89 ntBASIC2.2□□□□□ -2.06
MMP13P45452 MIR4724-201ENST00000579485 89 ntBASIC2.2□□□□□ -2.06
MMP13P45452 MIR203B-201ENST00000636080 86 ntBASIC2.2□□□□□ -2.06
MMP13P45452 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MMP13P45452 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP13P45452 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
MMP13P45452 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.19□□□□□ -2.06
MMP13P45452 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
MMP13P45452 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
MMP13P45452 Y_RNA.343-201ENST00000365354 112 ntBASIC2.19□□□□□ -2.06
MMP13P45452 RNU4-52P-201ENST00000384209 138 ntBASIC2.19□□□□□ -2.06
MMP13P45452 SNORA22C-201ENST00000384614 134 ntBASIC2.19□□□□□ -2.06
MMP13P45452 RNU6-768P-201ENST00000384683 107 ntBASIC2.19□□□□□ -2.06
MMP13P45452 MIR15B-201ENST00000385045 98 ntBASIC2.19□□□□□ -2.06
MMP13P45452 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
MMP13P45452 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AC006461.1-201ENST00000412637 326 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL161788.1-201ENST00000441805 169 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL121914.1-201ENST00000450188 156 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AC018868.1-201ENST00000491307 315 ntBASIC2.19□□□□□ -2.06
MMP13P45452 MIR548X2-201ENST00000579776 100 ntBASIC2.19□□□□□ -2.06
MMP13P45452 DNAJC19P2-201ENST00000593340 302 ntBASIC2.19□□□□□ -2.06
MMP13P45452 POLR3GP1-201ENST00000594073 261 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL929325.1-201ENST00000603096 117 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL021707.8-201ENST00000609428 183 ntBASIC2.19□□□□□ -2.06
MMP13P45452 AL159152.1-201ENST00000635019 2587 ntBASIC2.19□□□□□ -2.06
MMP13P45452 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP13P45452 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
MMP13P45452 RNU6-1290P-201ENST00000362957 109 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-1336P-201ENST00000383886 109 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-144P-201ENST00000383951 107 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-643P-201ENST00000384018 107 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-1117P-201ENST00000384525 104 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-1235P-201ENST00000384559 107 ntBASIC2.18□□□□□ -2.06
MMP13P45452 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.18□□□□□ -2.06
MMP13P45452 SNRPGP8-201ENST00000454064 226 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-498P-201ENST00000459468 107 ntBASIC2.18□□□□□ -2.06
MMP13P45452 AC092991.1-201ENST00000477176 376 ntBASIC2.18□□□□□ -2.06
MMP13P45452 AC107027.2-201ENST00000512197 115 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-991P-201ENST00000516168 107 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNU6-971P-201ENST00000516920 106 ntBASIC2.18□□□□□ -2.06
MMP13P45452 RNA5SP490-201ENST00000517141 136 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms