Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU6-1291P-201ENST00000516591 104 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU2-56P-201ENST00000516826 190 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 RNU7-116P-201ENST00000516940 62 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 SCARNA24.2-201ENST00000516968 130 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 AP002004.2-201ENST00000531656 154 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 AL161670.1-201ENST00000554348 137 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBEC1P41238 AL162424.1-201ENST00000602325 221 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 AL162730.1-201ENST00000605734 292 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.65□□□□□ -2.15
APOBEC1P41238 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.65□□□□□ -2.15
APOBEC1P41238 AC068647.2-201ENST00000637380 353 ntBASIC1.65□□□□□ -2.15
APOBEC1P41238 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.65□□□□□ -2.15
APOBEC1P41238 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
APOBEC1P41238 RNU6-1323P-201ENST00000384025 107 ntBASIC1.64□□□□□ -2.15
APOBEC1P41238 RPS4XP11-201ENST00000446897 772 ntBASIC1.64□□□□□ -2.15
APOBEC1P41238 SNORA28-201ENST00000606769 126 ntBASIC1.64□□□□□ -2.15
APOBEC1P41238 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBEC1P41238 AP001282.2-201ENST00000616149 309 ntBASIC1.64□□□□□ -2.15
APOBEC1P41238 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOBEC1P41238 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOBEC1P41238 AC100821.1-201ENST00000523153 2479 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
APOBEC1P41238 MIR335-201ENST00000362173 94 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 Y_RNA.237-201ENST00000364439 102 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 Y_RNA.265-201ENST00000364677 108 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 Y_RNA.483-201ENST00000384380 101 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 MT-TW-201ENST00000387382 68 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 Y_RNA.621-201ENST00000411065 96 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.63□□□□□ -2.15
APOBEC1P41238 U8.19-201ENST00000459095 133 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 RNU7-34P-201ENST00000459394 64 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AC091959.1-201ENST00000495857 238 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 SNORA31.10-201ENST00000516482 106 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 SNORA27.4-201ENST00000516650 95 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 RNU7-28P-201ENST00000516759 62 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 SNORA44.1-201ENST00000517031 108 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AC011604.1-201ENST00000545978 196 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 MIR4419B-201ENST00000577260 68 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 POLR3GP1-201ENST00000594073 261 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AL929325.1-201ENST00000603096 117 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 AC012493.3-201ENST00000604494 112 ntBASIC1.63□□□□□ -2.15
APOBEC1P41238 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
APOBEC1P41238 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBEC1P41238 RNU6-801P-201ENST00000364087 105 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 Y_RNA.396-201ENST00000383949 103 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 RNU6-472P-201ENST00000384299 107 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 SNORA72-201ENST00000384339 132 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 MIR568-201ENST00000385036 95 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 U8.13-201ENST00000390842 128 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 SNORA40.18-201ENST00000391200 128 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 AL135790.2-201ENST00000437701 267 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 snoU13.15-201ENST00000459407 104 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 AL049830.1-201ENST00000468034 425 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.62□□□□□ -2.15
APOBEC1P41238 AL078604.3-201ENST00000615580 211 ntBASIC1.62□□□□□ -2.15
APOBEC1P41238 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.62□□□□□ -2.15
APOBEC1P41238 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOBEC1P41238 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
APOBEC1P41238 SNORA1B-201ENST00000362535 133 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 Y_RNA.288-201ENST00000364854 92 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 SNORA72.4-201ENST00000384174 132 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 RNU6-196P-201ENST00000384315 107 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
APOBEC1P41238 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.61□□□□□ -2.15
APOBEC1P41238 AC003989.2-201ENST00000440224 169 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 AC104332.1-201ENST00000440471 797 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.61□□□□□ -2.15
APOBEC1P41238 RNU7-115P-201ENST00000516433 55 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 AP003357.1-201ENST00000604497 148 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 MIR8074-201ENST00000615081 81 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 MIR548AY-201ENST00000617669 107 ntBASIC1.61□□□□□ -2.15
APOBEC1P41238 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOBEC1P41238 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOBEC1P41238 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
APOBEC1P41238 UBE2WP1-201ENST00000362030 340 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 RNU6-899P-201ENST00000363947 107 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 RNU6-439P-201ENST00000384188 106 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 MIR9-3-201ENST00000385084 90 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 snosnR66.1-201ENST00000391095 99 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 RNA5SP482-201ENST00000391269 118 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 MIR1267-201ENST00000408723 78 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 JTBP1-201ENST00000441314 247 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 STAG3L5P-204ENST00000443759 179 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 RNU7-141P-201ENST00000459304 62 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 AC117454.1-201ENST00000491120 168 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 AC024405.2-202ENST00000532731 184 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 U4.1-201ENST00000620349 87 ntBASIC1.6□□□□□ -2.15
APOBEC1P41238 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
APOBEC1P41238 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
APOBEC1P41238 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms