Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RNU6-1019P-201ENST00000364424 107 ntBASIC2.42□□□□□ -2.02
LSP1P33241 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
LSP1P33241 RNA5SP501-201ENST00000410990 112 ntBASIC2.42□□□□□ -2.02
LSP1P33241 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
LSP1P33241 AL606517.2-201ENST00000442855 241 ntBASIC2.42□□□□□ -2.02
LSP1P33241 Y_RNA.662-201ENST00000516028 97 ntBASIC2.42□□□□□ -2.02
LSP1P33241 RNU6-1007P-201ENST00000516586 107 ntBASIC2.42□□□□□ -2.02
LSP1P33241 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
LSP1P33241 AP000553.5-201ENST00000641933 54 ntBASIC2.42□□□□□ -2.02
LSP1P33241 MIR562-201ENST00000384894 95 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MIR616-201ENST00000385293 97 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MT-TT-201ENST00000387460 66 ntBASIC2.41□□□□□ -2.02
LSP1P33241 SNORA48.1-201ENST00000390879 135 ntBASIC2.41□□□□□ -2.02
LSP1P33241 RNA5SP109-201ENST00000391010 116 ntBASIC2.41□□□□□ -2.02
LSP1P33241 AL512604.1-201ENST00000404812 257 ntBASIC2.41□□□□□ -2.02
LSP1P33241 AC105272.1-201ENST00000438604 198 ntBASIC2.41□□□□□ -2.02
LSP1P33241 AC074198.2-201ENST00000508153 258 ntBASIC2.41□□□□□ -2.02
LSP1P33241 Y_RNA.797-201ENST00000515977 94 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MIR4529-201ENST00000578110 78 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MIR4744-201ENST00000581563 82 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MIR2681-201ENST00000581814 105 ntBASIC2.41□□□□□ -2.02
LSP1P33241 AC022217.4-201ENST00000604389 163 ntBASIC2.41□□□□□ -2.02
LSP1P33241 MIR6840-201ENST00000611937 71 ntBASIC2.41□□□□□ -2.02
LSP1P33241 AC245884.12-201ENST00000615364 59 ntBASIC2.41□□□□□ -2.02
LSP1P33241 U6.106-201ENST00000636360 105 ntBASIC2.41□□□□□ -2.02
LSP1P33241 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
LSP1P33241 SNORA1B-201ENST00000362535 133 ntBASIC2.4□□□□□ -2.03
LSP1P33241 RNU6-103P-201ENST00000363686 107 ntBASIC2.4□□□□□ -2.03
LSP1P33241 SNORA6-201ENST00000384033 151 ntBASIC2.4□□□□□ -2.03
LSP1P33241 PCNPP3-201ENST00000393579 471 ntBASIC2.4□□□□□ -2.03
LSP1P33241 AC245047.4-201ENST00000433189 144 ntBASIC2.4□□□□□ -2.03
LSP1P33241 AL135938.1-201ENST00000443141 297 ntBASIC2.4□□□□□ -2.03
LSP1P33241 AC079804.2-201ENST00000490376 200 ntBASIC2.4□□□□□ -2.03
LSP1P33241 AC079600.2-201ENST00000550076 130 ntBASIC2.4□□□□□ -2.03
LSP1P33241 RPL23AP91-201ENST00000569211 455 ntBASIC2.4□□□□□ -2.03
LSP1P33241 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.03
LSP1P33241 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
LSP1P33241 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LSP1P33241 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LSP1P33241 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.39□□□□□ -2.03
LSP1P33241 RNU6-1209P-201ENST00000363655 107 ntBASIC2.39□□□□□ -2.03
LSP1P33241 SNORA5B-201ENST00000363786 132 ntBASIC2.39□□□□□ -2.03
LSP1P33241 Y_RNA.180-201ENST00000363867 113 ntBASIC2.39□□□□□ -2.03
LSP1P33241 Y_RNA.240-201ENST00000364469 95 ntBASIC2.39□□□□□ -2.03
LSP1P33241 RNA5SP496-201ENST00000391240 109 ntBASIC2.39□□□□□ -2.03
LSP1P33241 RNA5SP450-201ENST00000411206 102 ntBASIC2.39□□□□□ -2.03
LSP1P33241 AC245047.3-201ENST00000429428 127 ntBASIC2.39□□□□□ -2.03
LSP1P33241 RPS27P1-201ENST00000450552 247 ntBASIC2.39□□□□□ -2.03
LSP1P33241 AL049830.1-201ENST00000468034 425 ntBASIC2.39□□□□□ -2.03
LSP1P33241 RNU2-56P-201ENST00000516826 190 ntBASIC2.39□□□□□ -2.03
LSP1P33241 AP002004.2-201ENST00000531656 154 ntBASIC2.39□□□□□ -2.03
LSP1P33241 AC006023.1-201ENST00000603944 259 ntBASIC2.39□□□□□ -2.03
LSP1P33241 AL391903.3-201ENST00000612158 163 ntBASIC2.39□□□□□ -2.03
LSP1P33241 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LSP1P33241 Y_RNA.796-201ENST00000364268 102 ntBASIC2.38□□□□□ -2.03
LSP1P33241 Y_RNA.799-201ENST00000364992 102 ntBASIC2.38□□□□□ -2.03
LSP1P33241 Y_RNA.412-201ENST00000384001 104 ntBASIC2.38□□□□□ -2.03
LSP1P33241 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
LSP1P33241 MIR634-201ENST00000385208 97 ntBASIC2.38□□□□□ -2.03
LSP1P33241 RNU6-578P-201ENST00000390980 103 ntBASIC2.38□□□□□ -2.03
LSP1P33241 AL606845.1-201ENST00000404881 255 ntBASIC2.38□□□□□ -2.03
LSP1P33241 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
LSP1P33241 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.38□□□□□ -2.03
LSP1P33241 MRPS18CP4-201ENST00000535821 231 ntBASIC2.38□□□□□ -2.03
LSP1P33241 AL049861.1-201ENST00000603130 150 ntBASIC2.38□□□□□ -2.03
LSP1P33241 AC108706.1-201ENST00000611053 297 ntBASIC2.38□□□□□ -2.03
LSP1P33241 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LSP1P33241 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LSP1P33241 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
LSP1P33241 RNU6-859P-201ENST00000362728 107 ntBASIC2.37□□□□□ -2.03
LSP1P33241 Y_RNA.75-201ENST00000362927 97 ntBASIC2.37□□□□□ -2.03
LSP1P33241 RNU6-1228P-201ENST00000391014 107 ntBASIC2.37□□□□□ -2.03
LSP1P33241 Y_RNA.587-201ENST00000391210 103 ntBASIC2.37□□□□□ -2.03
LSP1P33241 RN7SKP101-201ENST00000411376 320 ntBASIC2.37□□□□□ -2.03
LSP1P33241 AC069257.2-201ENST00000441819 155 ntBASIC2.37□□□□□ -2.03
LSP1P33241 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
LSP1P33241 AC096725.1-201ENST00000514266 313 ntBASIC2.37□□□□□ -2.03
LSP1P33241 EIF4BP1-201ENST00000554881 351 ntBASIC2.37□□□□□ -2.03
LSP1P33241 GTF3AP2-201ENST00000557014 266 ntBASIC2.37□□□□□ -2.03
LSP1P33241 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.37□□□□□ -2.03
LSP1P33241 SUB1P4-201ENST00000566062 339 ntBASIC2.37□□□□□ -2.03
LSP1P33241 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.37□□□□□ -2.03
LSP1P33241 JPX_2.1-201ENST00000614161 69 ntBASIC2.37□□□□□ -2.03
LSP1P33241 U1.36-201ENST00000620684 176 ntBASIC2.37□□□□□ -2.03
LSP1P33241 SCARNA15.3-201ENST00000626315 122 ntBASIC2.37□□□□□ -2.03
LSP1P33241 SCARNA4.1-201ENST00000628597 123 ntBASIC2.37□□□□□ -2.03
LSP1P33241 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LSP1P33241 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.37□□□□□ -2.03
LSP1P33241 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
LSP1P33241 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LSP1P33241 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LSP1P33241 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
LSP1P33241 Y_RNA.253-201ENST00000364562 112 ntBASIC2.36□□□□□ -2.03
LSP1P33241 RNU6-275P-201ENST00000364910 107 ntBASIC2.36□□□□□ -2.03
LSP1P33241 RNA5SP37-201ENST00000365420 130 ntBASIC2.36□□□□□ -2.03
LSP1P33241 RNU6-301P-201ENST00000384277 107 ntBASIC2.36□□□□□ -2.03
LSP1P33241 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
LSP1P33241 MTND2P29-201ENST00000438595 412 ntBASIC2.36□□□□□ -2.03
LSP1P33241 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.36□□□□□ -2.03
LSP1P33241 HMGN1P7-201ENST00000491722 313 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 331.6 ms