Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 WWP1P1-201ENST00000466609 2769 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 RNU6-862P-201ENST00000362804 105 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 RNU4-80P-201ENST00000363200 141 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 Y_RNA.124-201ENST00000363339 93 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 SNORA20B-201ENST00000384220 132 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 AC008134.1-201ENST00000420943 193 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 AC060773.1-201ENST00000421698 310 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 SNORD65B-201ENST00000459126 73 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 SERF1AP1-201ENST00000514575 187 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 RNU6-1146P-201ENST00000516282 102 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 Y_RNA.680-201ENST00000516441 93 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 RPL21P9-201ENST00000556149 474 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.79□□□□□ -2.12
HOXC8P31273 AC006006.1-201ENST00000603082 144 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 AC037487.3-201ENST00000606668 112 ntBASIC1.79□□□□□ -2.12
HOXC8P31273 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.79□□□□□ -2.12
HOXC8P31273 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC8P31273 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HOXC8P31273 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.79□□□□□ -2.12
HOXC8P31273 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.78□□□□□ -2.12
HOXC8P31273 MIR335-201ENST00000362173 94 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 SNORA25.1-201ENST00000362326 128 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RNU6-414P-201ENST00000363705 104 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.188-201ENST00000363952 111 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RNU6-1240P-201ENST00000365155 104 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RNU6-407P-201ENST00000365280 104 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.350-201ENST00000365409 98 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RNU6-326P-201ENST00000365480 107 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.447-201ENST00000384184 113 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.518-201ENST00000384552 113 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 MIR1253-201ENST00000408273 105 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.618-201ENST00000410949 107 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 MTCO1P5-201ENST00000433573 344 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC069257.2-201ENST00000441819 155 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RPL39P38-201ENST00000467018 153 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC010409.1-201ENST00000487382 476 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 MTND1P19-201ENST00000511780 315 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC011406.1-201ENST00000512440 370 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 SNORA31.17-201ENST00000516953 127 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 RNU6-1271P-201ENST00000517049 105 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
HOXC8P31273 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.78□□□□□ -2.12
HOXC8P31273 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 MIR3128-201ENST00000581957 66 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AC103810.8-201ENST00000607347 118 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
HOXC8P31273 Y_RNA.54-201ENST00000362766 105 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 Y_RNA.226-201ENST00000364337 114 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 RNU6-1019P-201ENST00000364424 107 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 RNU6-60P-201ENST00000364792 103 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 RNU6-514P-201ENST00000384208 107 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 Y_RNA.562-201ENST00000384695 113 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HOXC8P31273 FTH1P12-201ENST00000432137 551 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 HMGN2P34-201ENST00000437647 269 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
HOXC8P31273 AC005840.1-201ENST00000498412 377 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.77□□□□□ -2.13
HOXC8P31273 AC005828.6-201ENST00000606610 232 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
HOXC8P31273 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HOXC8P31273 Y_RNA.136-201ENST00000363444 102 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 SNORD27-201ENST00000363981 72 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 AL603910.2-201ENST00000407268 136 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.76□□□□□ -2.13
HOXC8P31273 MTND4LP30-201ENST00000454092 297 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 RNU1-98P-201ENST00000458992 160 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 AC091959.1-201ENST00000495857 238 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 AC010598.1-201ENST00000510378 103 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 AC022513.1-201ENST00000624512 117 ntBASIC1.76□□□□□ -2.13
HOXC8P31273 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HOXC8P31273 SNORA27.1-201ENST00000362604 124 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 Y_RNA.60-201ENST00000362831 98 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNY1P10-201ENST00000363268 113 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNU4-13P-201ENST00000364019 141 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNU6-417P-201ENST00000384712 107 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 MIR873-201ENST00000401120 77 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNU2-61P-201ENST00000411069 191 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RN7SKP101-201ENST00000411376 320 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.75□□□□□ -2.13
HOXC8P31273 CST2P1-201ENST00000425770 87 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RPS27P22-201ENST00000478056 241 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNU6-191P-201ENST00000516295 94 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 RNA5SP481-201ENST00000516814 122 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.75□□□□□ -2.13
HOXC8P31273 MIR3684-201ENST00000579779 74 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 AL512605.2-201ENST00000592972 256 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 U2.14-201ENST00000615943 113 ntBASIC1.75□□□□□ -2.13
HOXC8P31273 Y_RNA.44-201ENST00000362676 108 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 Y_RNA.277-201ENST00000364754 102 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 Y_RNA.287-201ENST00000364853 94 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 Y_RNA.352-201ENST00000365439 102 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.6 ms