Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXA13P31271 AC005042.3-201ENST00000453230 174 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 AL163195.1-201ENST00000496941 348 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 RNU6-1143P-201ENST00000516125 104 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 RNU6-436P-201ENST00000516171 114 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 AC022254.1-201ENST00000567857 235 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 MIR4438-201ENST00000585271 93 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 AP000942.4-201ENST00000604811 241 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 SNORD113-5-201ENST00000607261 78 ntBASIC1.8□□□□□ -2.12
HOXA13P31271 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.8□□□□□ -2.12
HOXA13P31271 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.8□□□□□ -2.12
HOXA13P31271 Y_RNA.14-201ENST00000362415 103 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 RNU4-90P-201ENST00000362773 141 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 Y_RNA.60-201ENST00000362831 98 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 RNU6-414P-201ENST00000363705 104 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 SNORA20B-201ENST00000384220 132 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 AL031003.1-201ENST00000404229 172 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 RNU6-651P-201ENST00000411040 105 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 MTCO1P5-201ENST00000433573 344 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 RNU6-1132P-201ENST00000459214 107 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 AC010598.1-201ENST00000510378 103 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 AC015720.1-201ENST00000565251 277 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 AC005828.6-201ENST00000606610 232 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 AC062037.2-201ENST00000610137 73 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.79□□□□□ -2.12
HOXA13P31271 AC068700.1-201ENST00000565862 3754 ntBASIC1.79□□□□□ -2.12
HOXA13P31271 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXA13P31271 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HOXA13P31271 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 Y_RNA.243-201ENST00000364481 109 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 Y_RNA.288-201ENST00000364854 92 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 Y_RNA.361-201ENST00000365515 120 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 Y_RNA.447-201ENST00000384184 113 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 RNU6-296P-201ENST00000384608 107 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 Y_RNA.562-201ENST00000384695 113 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 COX6CP10-201ENST00000416832 224 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 POLR2KP2-201ENST00000438155 177 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 SEPT14P8-201ENST00000508026 178 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 RNA5SP437-201ENST00000517249 129 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 AC024995.1-201ENST00000523014 93 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 AC004817.2-201ENST00000561794 651 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 MIR4643-201ENST00000577473 78 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 SNORD53B-201ENST00000577887 78 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 MIR3128-201ENST00000581957 66 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 BX248123.2-201ENST00000606318 124 ntBASIC1.78□□□□□ -2.12
HOXA13P31271 AL391987.6-201ENST00000305671 199 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 RNU6-324P-201ENST00000363957 106 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 Y_RNA.569-201ENST00000384749 103 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
HOXA13P31271 RNA5SP109-201ENST00000391010 116 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.77□□□□□ -2.13
HOXA13P31271 SERF1AP1-201ENST00000514575 187 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 Y_RNA.673-201ENST00000516306 88 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 RNA5SP481-201ENST00000516814 122 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 SNORA44.1-201ENST00000517031 108 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 AC006380.1-201ENST00000603598 186 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 U6.73-201ENST00000619194 103 ntBASIC1.77□□□□□ -2.13
HOXA13P31271 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
HOXA13P31271 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
HOXA13P31271 Y_RNA.117-201ENST00000363294 101 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 SNORD116-13-201ENST00000384408 92 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 Y_RNA.539-201ENST00000384635 107 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 AL603910.2-201ENST00000407268 136 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 RNU7-34P-201ENST00000459394 64 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 AC091959.1-201ENST00000495857 238 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 RNU6-63P-201ENST00000516690 95 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 MIR3684-201ENST00000579779 74 ntBASIC1.76□□□□□ -2.13
HOXA13P31271 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HOXA13P31271 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HOXA13P31271 SNORD27-201ENST00000363981 72 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU4-13P-201ENST00000364019 141 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU6-1048P-201ENST00000364054 107 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 Y_RNA.338-201ENST00000365320 114 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 Y_RNA.350-201ENST00000365409 98 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU6-662P-201ENST00000384253 104 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 Y_RNA.556-201ENST00000384677 113 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU2-61P-201ENST00000411069 191 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RPL23AP36-201ENST00000413895 458 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 MTND4LP30-201ENST00000454092 297 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNA5SP20-201ENST00000515976 84 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU6-191P-201ENST00000516295 94 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 RNU2-31P-201ENST00000516954 155 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 MIR8074-201ENST00000615081 81 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 U2.14-201ENST00000615943 113 ntBASIC1.75□□□□□ -2.13
HOXA13P31271 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HOXA13P31271 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HOXA13P31271 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXA13P31271 AC100821.1-201ENST00000523153 2479 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 SNORA27.1-201ENST00000362604 124 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 Y_RNA.136-201ENST00000363444 102 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNU6-271P-201ENST00000363858 105 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 SNORA63D-201ENST00000364359 132 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 Y_RNA.277-201ENST00000364754 102 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 SNORA4.2-201ENST00000365313 147 ntBASIC1.74□□□□□ -2.13
HOXA13P31271 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms