Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 SNORD113-5-201ENST00000607261 78 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 AL773524.1-201ENST00000614065 229 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 snoZ196.1-201ENST00000625269 89 ntBASIC0.97□□□□□ -2.25
COL5A1P20908 MIR330-201ENST00000362196 94 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU6-801P-201ENST00000364087 105 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 SNORD32B-201ENST00000364460 84 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU6-1175P-201ENST00000365200 107 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 Y_RNA.459-201ENST00000384251 102 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU6-574P-201ENST00000384265 107 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR568-201ENST00000385036 95 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR29C-201ENST00000385231 88 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR676-201ENST00000390702 67 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR300-201ENST00000401138 83 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.96□□□□□ -2.26
COL5A1P20908 AC015922.2-201ENST00000435593 184 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.96□□□□□ -2.26
COL5A1P20908 HSPE1P24-201ENST00000450782 238 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.96□□□□□ -2.26
COL5A1P20908 MTND4LP30-201ENST00000454092 297 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU7-57P-201ENST00000459540 60 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC010531.2-201ENST00000465012 153 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RPL26P26-201ENST00000480251 434 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.96□□□□□ -2.26
COL5A1P20908 SERF1AP1-201ENST00000514575 187 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR3198-2-201ENST00000577868 80 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR4659A-201ENST00000580269 81 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR4753-201ENST00000585119 83 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RAC1P9-201ENST00000604990 392 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC005828.6-201ENST00000606610 232 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.96□□□□□ -2.26
COL5A1P20908 AC010487.4-201ENST00000637027 61 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 Y_RNA.361-201ENST00000365515 120 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 Y_RNA.446-201ENST00000384178 104 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU6-196P-201ENST00000384315 107 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 SNORA40.19-201ENST00000390846 128 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 Y_RNA.581-201ENST00000391017 97 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU4-30P-201ENST00000410245 143 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.96□□□□□ -2.26
COL5A1P20908 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.96□□□□□ -2.26
COL5A1P20908 AC004386.2-201ENST00000441858 148 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RNU1-98P-201ENST00000458992 160 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.96□□□□□ -2.26
COL5A1P20908 RNY3P15-201ENST00000516297 97 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 MIR4299-201ENST00000577899 72 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 RPS29P30-201ENST00000600975 111 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC104695.3-201ENST00000604052 296 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AC011373.1-201ENST00000607270 237 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 AP001282.2-201ENST00000616149 309 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 U4.1-201ENST00000620349 87 ntBASIC0.96□□□□□ -2.26
COL5A1P20908 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL5A1P20908 RNU6-862P-201ENST00000362804 105 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 Y_RNA.84-201ENST00000363011 104 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 snoU2_19.2-201ENST00000363024 80 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 RNU6-879P-201ENST00000364328 108 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 Y_RNA.243-201ENST00000364481 109 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 Y_RNA.368-201ENST00000365547 113 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 RNU6-20P-201ENST00000384106 107 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 RNU6-1310P-201ENST00000384153 107 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 RNU6-708P-201ENST00000384217 107 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 RNU6-1274P-201ENST00000384557 107 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 MIR218-1-201ENST00000384999 110 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AL390729.2-201ENST00000416137 156 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC060773.1-201ENST00000421698 310 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC010469.2-201ENST00000496412 480 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC022868.1-201ENST00000517767 391 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC091178.2-201ENST00000584401 117 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
COL5A1P20908 AL390123.1-201ENST00000603216 237 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AL355297.3-201ENST00000604082 446 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AP000942.4-201ENST00000604811 241 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC011476.5-201ENST00000615594 130 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AC005562.2-201ENST00000618264 111 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 AL109933.3-201ENST00000619095 188 ntBASIC0.95□□□□□ -2.26
COL5A1P20908 snoU2-30.2-201ENST00000362805 70 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.230-201ENST00000364348 109 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-1240P-201ENST00000365155 104 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.350-201ENST00000365409 98 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.396-201ENST00000383949 103 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 SNORD63-201ENST00000384262 68 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 Y_RNA.512-201ENST00000384518 102 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MT-TW-201ENST00000387382 68 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MT-TG-201ENST00000387429 68 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNA5SP467-201ENST00000391274 118 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 MIR1302-6-201ENST00000408466 90 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-1199P-201ENST00000411249 104 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.94□□□□□ -2.26
COL5A1P20908 POLR2KP2-201ENST00000438155 177 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC074290.1-201ENST00000448883 135 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC245102.2-201ENST00000448956 180 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 TRBVB-201ENST00000477100 408 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 AC097462.1-201ENST00000514125 324 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU6-408P-201ENST00000515910 100 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 SNORA40.15-201ENST00000516884 107 ntBASIC0.94□□□□□ -2.26
COL5A1P20908 RNU2-12P-201ENST00000517216 168 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms