Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 UBE2V2P2-201ENST00000587677 504 ntBASIC0.97□□□□□ -2.25
XRCC1P18887 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.97□□□□□ -2.25
XRCC1P18887 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
XRCC1P18887 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
XRCC1P18887 RNU6-626P-201ENST00000363354 107 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 Y_RNA.259-201ENST00000364619 101 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 Y_RNA.314-201ENST00000365114 102 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 MRPS18CP6-201ENST00000423587 223 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 AC093850.1-201ENST00000454121 251 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 SNORA31.2-201ENST00000516019 134 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 RNU6-63P-201ENST00000516690 95 ntBASIC0.96□□□□□ -2.26
XRCC1P18887 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.96□□□□□ -2.26
XRCC1P18887 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
XRCC1P18887 Y_RNA.27-201ENST00000362540 103 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 RNU4-79P-201ENST00000362764 141 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 RNU6-20P-201ENST00000384106 107 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 AC245047.7-201ENST00000440265 293 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 RNU7-169P-201ENST00000459456 61 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 AC055872.1-201ENST00000570978 278 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 AL117336.2-201ENST00000602435 335 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
XRCC1P18887 Y_RNA.101-201ENST00000363154 102 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 MIR559-201ENST00000385188 96 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 RNY4P36-201ENST00000391116 96 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 RNU2-61P-201ENST00000411069 191 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 RPS4XP11-201ENST00000446897 772 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 LINC01399-202ENST00000458450 244 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 MIR4659A-201ENST00000580269 81 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 MIR4762-201ENST00000585261 75 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 VN1R91P-201ENST00000594377 169 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 AC120024.3-201ENST00000603167 156 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 AC138305.3-201ENST00000624988 240 ntBASIC0.94□□□□□ -2.26
XRCC1P18887 Y_RNA.70-201ENST00000362886 110 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 Y_RNA.224-201ENST00000364308 111 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 U8.5-201ENST00000364528 136 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-1040P-201ENST00000383974 107 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 Y_RNA.446-201ENST00000384178 104 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-163P-201ENST00000384396 106 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 MIR452-201ENST00000385020 85 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-910P-201ENST00000390844 107 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 Y_RNA.621-201ENST00000411065 96 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-1304P-201ENST00000411374 106 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 MTCO2P27-201ENST00000420740 428 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.93□□□□□ -2.26
XRCC1P18887 CHEK2P4-201ENST00000450340 246 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 AC048334.1-201ENST00000477975 159 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-947P-201ENST00000516264 106 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 RNU6-277P-201ENST00000516272 106 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 Y_RNA.673-201ENST00000516306 88 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.93□□□□□ -2.26
XRCC1P18887 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
XRCC1P18887 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
XRCC1P18887 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
XRCC1P18887 SNORD68-201ENST00000363214 84 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 RNU6-324P-201ENST00000363957 106 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 Y_RNA.428-201ENST00000384078 102 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 SNORA80D-201ENST00000384488 135 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 RNU6-710P-201ENST00000410424 105 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 RNU6-1199P-201ENST00000411249 104 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 AL390729.2-201ENST00000416137 156 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 AC104332.1-201ENST00000440471 797 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 RNU6-436P-201ENST00000516171 114 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 RNU6-155P-201ENST00000516347 100 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 Y_RNA.718-201ENST00000517110 102 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 AC011604.1-201ENST00000545978 196 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 FAM106DP-201ENST00000586416 501 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 AC022441.3-201ENST00000605737 136 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 AL138825.1-201ENST00000618587 192 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 MTND4LP32-201ENST00000636111 270 ntBASIC0.92□□□□□ -2.26
XRCC1P18887 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
XRCC1P18887 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 Y_RNA.116-201ENST00000363292 103 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 RNY3P11-201ENST00000364153 102 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.91□□□□□ -2.26
XRCC1P18887 FGF7P4-201ENST00000509595 295 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 SNORD79.1-201ENST00000516069 84 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 RNU6-699P-201ENST00000517081 110 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 SNORD116.3-201ENST00000517176 78 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 RN7SKP295-201ENST00000517264 153 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 AC005972.2-201ENST00000604690 348 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 AC004832.4-201ENST00000608952 331 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 AC010205.1-201ENST00000616668 449 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 MIR1302-1-201ENST00000637932 143 ntBASIC0.91□□□□□ -2.26
XRCC1P18887 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.9□□□□□ -2.26
XRCC1P18887 Y_RNA.187-201ENST00000363918 113 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 RNU6-1283P-201ENST00000365314 105 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 Y_RNA.390-201ENST00000383932 102 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 SNORD116-29-201ENST00000384516 83 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 MIR518E-201ENST00000385252 88 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 AC063976.4-201ENST00000421971 163 ntBASIC0.9□□□□□ -2.27
XRCC1P18887 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.9□□□□□ -2.27
XRCC1P18887 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms