Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RNU2-32P-201ENST00000411193 191 ntBASIC3.21□□□□□ -1.9
BMP3P12645 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.21□□□□□ -1.9
BMP3P12645 RPL39P34-201ENST00000477141 156 ntBASIC3.21□□□□□ -1.9
BMP3P12645 MRPS17P9-201ENST00000511924 393 ntBASIC3.21□□□□□ -1.9
BMP3P12645 RNA5SP281-201ENST00000516504 135 ntBASIC3.21□□□□□ -1.9
BMP3P12645 RNU6-1149P-201ENST00000516810 97 ntBASIC3.21□□□□□ -1.9
BMP3P12645 ZNF861P-201ENST00000588126 639 ntBASIC3.21□□□□□ -1.9
BMP3P12645 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.2□□□□□ -1.9
BMP3P12645 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BMP3P12645 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BMP3P12645 AL596211.1-201ENST00000569873 2277 ntBASIC3.2□□□□□ -1.9
BMP3P12645 MIR488-201ENST00000365739 83 ntBASIC3.2□□□□□ -1.9
BMP3P12645 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.2□□□□□ -1.9
BMP3P12645 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.2□□□□□ -1.9
BMP3P12645 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.2□□□□□ -1.9
BMP3P12645 RNU2-34P-201ENST00000516534 121 ntBASIC3.2□□□□□ -1.9
BMP3P12645 SCARNA15-202ENST00000516881 127 ntBASIC3.2□□□□□ -1.9
BMP3P12645 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.2□□□□□ -1.9
BMP3P12645 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
BMP3P12645 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.2□□□□□ -1.9
BMP3P12645 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.2□□□□□ -1.9
BMP3P12645 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BMP3P12645 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BMP3P12645 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.19□□□□□ -1.9
BMP3P12645 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
BMP3P12645 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
BMP3P12645 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
BMP3P12645 MIR449A-201ENST00000362113 91 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU1-72P-201ENST00000362976 153 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU6-888P-201ENST00000363010 101 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU6-440P-201ENST00000390882 105 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU6-1096P-201ENST00000517089 102 ntBASIC3.19□□□□□ -1.9
BMP3P12645 RNU6-1270P-201ENST00000517128 108 ntBASIC3.19□□□□□ -1.9
BMP3P12645 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
BMP3P12645 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BMP3P12645 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
BMP3P12645 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BMP3P12645 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BMP3P12645 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
BMP3P12645 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.18□□□□□ -1.9
BMP3P12645 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BMP3P12645 MIR26A1-201ENST00000362205 77 ntBASIC3.18□□□□□ -1.9
BMP3P12645 Y_RNA.49-201ENST00000362714 112 ntBASIC3.18□□□□□ -1.9
BMP3P12645 SNORA63.5-201ENST00000363548 123 ntBASIC3.18□□□□□ -1.9
BMP3P12645 RNU6-438P-201ENST00000365561 103 ntBASIC3.18□□□□□ -1.9
BMP3P12645 SNORD24-201ENST00000383884 75 ntBASIC3.18□□□□□ -1.9
BMP3P12645 RNU6-1113P-201ENST00000384348 107 ntBASIC3.18□□□□□ -1.9
BMP3P12645 SNORD77.3-201ENST00000391113 65 ntBASIC3.18□□□□□ -1.9
BMP3P12645 AC003982.1-202ENST00000469928 248 ntBASIC3.18□□□□□ -1.9
BMP3P12645 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
BMP3P12645 RNA5SP112-201ENST00000515937 99 ntBASIC3.18□□□□□ -1.9
BMP3P12645 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.18□□□□□ -1.9
BMP3P12645 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
BMP3P12645 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
BMP3P12645 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BMP3P12645 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.18□□□□□ -1.9
BMP3P12645 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
BMP3P12645 RNU6-859P-201ENST00000362728 107 ntBASIC3.17□□□□□ -1.9
BMP3P12645 Y_RNA.544-201ENST00000384650 113 ntBASIC3.17□□□□□ -1.9
BMP3P12645 MIR196B-201ENST00000384852 84 ntBASIC3.17□□□□□ -1.9
BMP3P12645 MIR548A2-201ENST00000384956 97 ntBASIC3.17□□□□□ -1.9
BMP3P12645 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
BMP3P12645 HMGN2P18-201ENST00000450680 270 ntBASIC3.17□□□□□ -1.9
BMP3P12645 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
BMP3P12645 AC011406.1-201ENST00000512440 370 ntBASIC3.17□□□□□ -1.9
BMP3P12645 Y_RNA.666-201ENST00000516187 112 ntBASIC3.17□□□□□ -1.9
BMP3P12645 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.17□□□□□ -1.9
BMP3P12645 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
BMP3P12645 AC062037.1-201ENST00000605302 128 ntBASIC3.17□□□□□ -1.9
BMP3P12645 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
BMP3P12645 MIR1248-201ENST00000629190 106 ntBASIC3.17□□□□□ -1.9
BMP3P12645 AL589743.1-201ENST00000551932 2712 ntBASIC3.17□□□□□ -1.9
BMP3P12645 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
BMP3P12645 MIR520G-201ENST00000385064 90 ntBASIC3.16□□□□□ -1.9
BMP3P12645 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
BMP3P12645 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
BMP3P12645 AL117342.1-201ENST00000404861 406 ntBASIC3.16□□□□□ -1.9
BMP3P12645 EDDM3CP-201ENST00000415977 425 ntBASIC3.16□□□□□ -1.9
BMP3P12645 RNU6-970P-201ENST00000516312 107 ntBASIC3.16□□□□□ -1.9
BMP3P12645 MIR3945-201ENST00000581853 98 ntBASIC3.16□□□□□ -1.9
BMP3P12645 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.16□□□□□ -1.9
BMP3P12645 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.16□□□□□ -1.9
BMP3P12645 MIR376A2-201ENST00000636782 80 ntBASIC3.16□□□□□ -1.9
BMP3P12645 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
BMP3P12645 Y_RNA.198-201ENST00000364013 98 ntBASIC3.15□□□□□ -1.91
BMP3P12645 MIR181B1-201ENST00000385240 110 ntBASIC3.15□□□□□ -1.91
BMP3P12645 AL031183.1-201ENST00000457667 207 ntBASIC3.15□□□□□ -1.91
BMP3P12645 HMGN1P7-201ENST00000491722 313 ntBASIC3.15□□□□□ -1.91
BMP3P12645 RNU6-109P-201ENST00000516364 107 ntBASIC3.15□□□□□ -1.91
BMP3P12645 RNU6-184P-201ENST00000516514 107 ntBASIC3.15□□□□□ -1.91
BMP3P12645 RNU6-586P-201ENST00000517265 104 ntBASIC3.15□□□□□ -1.91
BMP3P12645 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.15□□□□□ -1.91
BMP3P12645 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.15□□□□□ -1.91
BMP3P12645 AC008507.4-201ENST00000585464 127 ntBASIC3.15□□□□□ -1.91
BMP3P12645 U2.20-201ENST00000613956 192 ntBASIC3.15□□□□□ -1.91
BMP3P12645 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
BMP3P12645 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
BMP3P12645 RNU6-486P-201ENST00000363116 107 ntBASIC3.14□□□□□ -1.91
BMP3P12645 Y_RNA.253-201ENST00000364562 112 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms