Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 RNU6-1116P-201ENST00000517269 99 ntBASIC1.27□□□□□ -2.21
KRT3P12035 7SK.8-201ENST00000612110 250 ntBASIC1.27□□□□□ -2.21
KRT3P12035 7SK.11-201ENST00000615477 250 ntBASIC1.27□□□□□ -2.21
KRT3P12035 7SK.13-201ENST00000622040 250 ntBASIC1.27□□□□□ -2.21
KRT3P12035 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRT3P12035 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
KRT3P12035 Y_RNA.172-201ENST00000363765 102 ntBASIC1.26□□□□□ -2.21
KRT3P12035 Y_RNA.230-201ENST00000364348 109 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNU1-115P-201ENST00000365329 160 ntBASIC1.26□□□□□ -2.21
KRT3P12035 Y_RNA.458-201ENST00000384240 102 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNU6-937P-201ENST00000384325 106 ntBASIC1.26□□□□□ -2.21
KRT3P12035 SNORA12.1-201ENST00000390873 148 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNA5SP482-201ENST00000391269 118 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNU5A-5P-201ENST00000411054 116 ntBASIC1.26□□□□□ -2.21
KRT3P12035 RNU6-1199P-201ENST00000411249 104 ntBASIC1.26□□□□□ -2.21
KRT3P12035 DYNLT3P2-201ENST00000442517 295 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AC005042.3-201ENST00000453230 174 ntBASIC1.26□□□□□ -2.21
KRT3P12035 U8.20-201ENST00000459445 131 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AC092991.1-201ENST00000477176 376 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.26□□□□□ -2.21
KRT3P12035 AC040926.1-201ENST00000530195 238 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AL117336.2-201ENST00000602435 335 ntBASIC1.26□□□□□ -2.21
KRT3P12035 LARP7P1-201ENST00000605576 316 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AC022441.3-201ENST00000605737 136 ntBASIC1.26□□□□□ -2.21
KRT3P12035 AL121655.1-201ENST00000605811 308 ntBASIC1.26□□□□□ -2.21
KRT3P12035 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
KRT3P12035 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
KRT3P12035 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KRT3P12035 RNU6-199P-201ENST00000362954 107 ntBASIC1.25□□□□□ -2.21
KRT3P12035 RNU6-163P-201ENST00000384396 106 ntBASIC1.25□□□□□ -2.21
KRT3P12035 Y_RNA.526-201ENST00000384572 110 ntBASIC1.25□□□□□ -2.21
KRT3P12035 MCFD2P1-201ENST00000417812 300 ntBASIC1.25□□□□□ -2.21
KRT3P12035 PIGPP3-201ENST00000425307 415 ntBASIC1.25□□□□□ -2.21
KRT3P12035 RPS4XP11-201ENST00000446897 772 ntBASIC1.25□□□□□ -2.21
KRT3P12035 OR9P1P-201ENST00000496431 281 ntBASIC1.25□□□□□ -2.21
KRT3P12035 RNU6-237P-201ENST00000515985 71 ntBASIC1.25□□□□□ -2.21
KRT3P12035 RNU6-397P-201ENST00000516226 104 ntBASIC1.25□□□□□ -2.21
KRT3P12035 SNORA40.14-201ENST00000516543 86 ntBASIC1.25□□□□□ -2.21
KRT3P12035 AC011604.1-201ENST00000545978 196 ntBASIC1.25□□□□□ -2.21
KRT3P12035 MIR4769-201ENST00000584126 77 ntBASIC1.25□□□□□ -2.21
KRT3P12035 AC124312.5-201ENST00000604451 268 ntBASIC1.25□□□□□ -2.21
KRT3P12035 AL157834.3-201ENST00000615543 103 ntBASIC1.25□□□□□ -2.21
KRT3P12035 uc_338.22-201ENST00000622722 187 ntBASIC1.25□□□□□ -2.21
KRT3P12035 AC090574.1-201ENST00000623186 233 ntBASIC1.25□□□□□ -2.21
KRT3P12035 AC091925.1-201ENST00000623204 462 ntBASIC1.25□□□□□ -2.21
KRT3P12035 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.25□□□□□ -2.21
KRT3P12035 AC068647.2-201ENST00000637380 353 ntBASIC1.25□□□□□ -2.21
KRT3P12035 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.25□□□□□ -2.21
KRT3P12035 MTND4P29-201ENST00000503122 1372 ntBASIC1.24□□□□□ -2.21
KRT3P12035 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
KRT3P12035 Y_RNA.31-201ENST00000362574 102 ntBASIC1.24□□□□□ -2.21
KRT3P12035 RNU4-50P-201ENST00000364361 141 ntBASIC1.24□□□□□ -2.21
KRT3P12035 AL162725.1-201ENST00000435405 301 ntBASIC1.24□□□□□ -2.21
KRT3P12035 AC104332.1-201ENST00000440471 797 ntBASIC1.24□□□□□ -2.21
KRT3P12035 RPL30P7-201ENST00000479312 323 ntBASIC1.24□□□□□ -2.21
KRT3P12035 AL512310.8-201ENST00000550183 120 ntBASIC1.24□□□□□ -2.21
KRT3P12035 MIR3145-201ENST00000580727 82 ntBASIC1.24□□□□□ -2.21
KRT3P12035 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.24□□□□□ -2.21
KRT3P12035 DEFB117-201ENST00000602356 141 ntBASIC1.24□□□□□ -2.21
KRT3P12035 AL050343.2-201ENST00000607338 280 ntBASIC1.24□□□□□ -2.21
KRT3P12035 RNA5SP327-201ENST00000362494 101 ntBASIC1.23□□□□□ -2.21
KRT3P12035 SNORD114-7-201ENST00000362520 77 ntBASIC1.23□□□□□ -2.21
KRT3P12035 RNU6-424P-201ENST00000384367 105 ntBASIC1.23□□□□□ -2.21
KRT3P12035 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
KRT3P12035 RNU6-1105P-201ENST00000384774 107 ntBASIC1.23□□□□□ -2.21
KRT3P12035 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
KRT3P12035 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
KRT3P12035 AC024067.1-201ENST00000426199 223 ntBASIC1.23□□□□□ -2.21
KRT3P12035 Z98949.2-201ENST00000440996 144 ntBASIC1.23□□□□□ -2.21
KRT3P12035 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
KRT3P12035 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
KRT3P12035 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.23□□□□□ -2.21
KRT3P12035 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KRT3P12035 RNU6-450P-201ENST00000364654 107 ntBASIC1.22□□□□□ -2.21
KRT3P12035 Y_RNA.341-201ENST00000365341 102 ntBASIC1.22□□□□□ -2.21
KRT3P12035 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
KRT3P12035 AC005972.2-201ENST00000604690 348 ntBASIC1.22□□□□□ -2.21
KRT3P12035 AC010205.1-201ENST00000616668 449 ntBASIC1.22□□□□□ -2.21
KRT3P12035 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.22□□□□□ -2.21
KRT3P12035 RNA5SP432-201ENST00000362480 116 ntBASIC1.21□□□□□ -2.22
KRT3P12035 RNU6-1084P-201ENST00000362498 107 ntBASIC1.21□□□□□ -2.22
KRT3P12035 Y_RNA.389-201ENST00000383924 113 ntBASIC1.21□□□□□ -2.22
KRT3P12035 Y_RNA.460-201ENST00000384255 102 ntBASIC1.21□□□□□ -2.22
KRT3P12035 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL451046.2-201ENST00000403074 277 ntBASIC1.21□□□□□ -2.22
KRT3P12035 RNU6-710P-201ENST00000410424 105 ntBASIC1.21□□□□□ -2.22
KRT3P12035 RNU2-61P-201ENST00000411069 191 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL390729.2-201ENST00000416137 156 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.21□□□□□ -2.22
KRT3P12035 MTND4P19-201ENST00000446659 478 ntBASIC1.21□□□□□ -2.22
KRT3P12035 RPS20P10-201ENST00000451209 253 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AC093852.1-201ENST00000503587 266 ntBASIC1.21□□□□□ -2.22
KRT3P12035 SNORA25.10-201ENST00000515926 124 ntBASIC1.21□□□□□ -2.22
KRT3P12035 RNA5SP458-201ENST00000516188 119 ntBASIC1.21□□□□□ -2.22
KRT3P12035 Y_RNA.713-201ENST00000517013 96 ntBASIC1.21□□□□□ -2.22
KRT3P12035 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
KRT3P12035 FAM106DP-201ENST00000586416 501 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms