Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 SNORD116-3-201ENST00000384287 95 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 SNORD116-7-201ENST00000384404 95 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 SNORD116-5-201ENST00000384462 95 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 SNORD105-201ENST00000386910 85 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 MIR1827-201ENST00000408549 66 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.36□□□□□ -2.35
ERCC1P07992 RNU6-864P-201ENST00000516256 108 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.36□□□□□ -2.35
ERCC1P07992 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 MIR1273G-201ENST00000577677 100 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 AF250324.2-201ENST00000608299 610 ntBASIC0.36□□□□□ -2.35
ERCC1P07992 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.36□□□□□ -2.35
ERCC1P07992 Y_RNA.540-201ENST00000384638 111 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 RNU6-373P-201ENST00000411247 98 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 MRPS18CP6-201ENST00000423587 223 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 MTND1P26-201ENST00000440488 538 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 SNORD5.1-201ENST00000458800 75 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 RNU7-87P-201ENST00000459343 62 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 RNU6-273P-201ENST00000516937 96 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 MTND3P12-201ENST00000559068 328 ntBASIC0.35□□□□□ -2.35
ERCC1P07992 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.35□□□□□ -2.35
ERCC1P07992 Y_RNA.361-201ENST00000365515 120 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 RNU6-1310P-201ENST00000384153 107 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 Y_RNA.557-201ENST00000384680 107 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 MIR7-2-201ENST00000384970 110 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 RNU6-700P-201ENST00000391043 107 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 RNU6-1304P-201ENST00000411374 106 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 MTND1P4-201ENST00000435196 415 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.34□□□□□ -2.36
ERCC1P07992 AL392103.1-201ENST00000447000 198 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.34□□□□□ -2.36
ERCC1P07992 SNORA40.9-201ENST00000515895 93 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 AC093027.1-201ENST00000546698 429 ntBASIC0.34□□□□□ -2.36
ERCC1P07992 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.34□□□□□ -2.36
ERCC1P07992 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
ERCC1P07992 RNU6-1013P-201ENST00000384180 107 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 MTND1P1-201ENST00000445453 368 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 MTND1P17-201ENST00000448961 204 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.33□□□□□ -2.36
ERCC1P07992 SNORD123-201ENST00000459473 70 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 RNU6-1337P-201ENST00000516525 95 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 MIR4300-201ENST00000581016 96 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AC005730.3-201ENST00000583067 366 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 MIR6128-201ENST00000615528 109 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AC090617.10-201ENST00000624308 134 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AC008133.2-201ENST00000624540 351 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 MIR6516-201ENST00000630554 81 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AC024614.3-201ENST00000637860 256 ntBASIC0.33□□□□□ -2.36
ERCC1P07992 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 MIR1-1-201ENST00000362147 71 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 RNU6-1084P-201ENST00000362498 107 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 RNY1P16-201ENST00000363063 111 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 MIR522-201ENST00000385071 87 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 HMGN2P32-201ENST00000444648 269 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 Y_RNA.688-201ENST00000516565 95 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 SNORD45.4-201ENST00000516629 73 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 AC105029.1-201ENST00000520250 669 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 MIR3662-201ENST00000637030 95 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 AC100810.6-201ENST00000638068 285 ntBASIC0.32□□□□□ -2.36
ERCC1P07992 RNU6-654P-201ENST00000364373 107 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 SNORA2B-201ENST00000384583 137 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 MIR140-201ENST00000385282 100 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 RNA5SP193-201ENST00000410353 107 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 RNU6-177P-201ENST00000411257 104 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AL390729.2-201ENST00000416137 156 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AC005534.2-201ENST00000431047 433 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.31□□□□□ -2.36
ERCC1P07992 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 RNU6-566P-201ENST00000516790 107 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 RNU6-1088P-201ENST00000516850 104 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 RNU6-1314P-201ENST00000517139 104 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AC022616.4-201ENST00000522985 181 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AC104695.3-201ENST00000604052 296 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 AC005014.2-201ENST00000607795 599 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 MIR4251-201ENST00000635819 61 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 MIR924-201ENST00000638017 53 ntBASIC0.31□□□□□ -2.36
ERCC1P07992 Y_RNA.253-201ENST00000364562 112 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 snoU2-30.1-201ENST00000365012 70 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 RNU6-318P-201ENST00000384283 103 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 MIR1302-7-201ENST00000408841 72 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 RNU2-16P-201ENST00000410712 136 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 AC009161.1-201ENST00000417306 376 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 MLLT10P1-201ENST00000418346 262 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.3□□□□□ -2.36
ERCC1P07992 SNORA68.3-201ENST00000515906 83 ntBASIC0.3□□□□□ -2.36
ERCC1P07992 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.3□□□□□ -2.36
ERCC1P07992 RNU6-874P-201ENST00000362390 105 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 SNORD115-30-201ENST00000364117 82 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 RNY1P8-201ENST00000383970 114 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 RNU6-613P-201ENST00000410412 108 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 AL139396.1-201ENST00000421137 167 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 U8.22-201ENST00000459141 133 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.29□□□□□ -2.36
ERCC1P07992 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.29□□□□□ -2.36
ERCC1P07992 AC105313.1-201ENST00000509121 353 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 MTND2P38-201ENST00000522536 667 ntBASIC0.29□□□□□ -2.36
ERCC1P07992 AC109635.3-201ENST00000529536 185 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms