Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU4-13P-201ENST00000364019 141 ntBASIC3.3□□□□□ -1.88
NEFMP07197 SNORA25.7-201ENST00000364375 127 ntBASIC3.3□□□□□ -1.88
NEFMP07197 RNU6-1274P-201ENST00000384557 107 ntBASIC3.3□□□□□ -1.88
NEFMP07197 RNU6-1235P-201ENST00000384559 107 ntBASIC3.3□□□□□ -1.88
NEFMP07197 RNU6-498P-201ENST00000459468 107 ntBASIC3.3□□□□□ -1.88
NEFMP07197 Y_RNA.712-201ENST00000517011 92 ntBASIC3.3□□□□□ -1.88
NEFMP07197 RNA5SP402-201ENST00000517148 110 ntBASIC3.3□□□□□ -1.88
NEFMP07197 AC018630.3-201ENST00000542637 96 ntBASIC3.3□□□□□ -1.88
NEFMP07197 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.3□□□□□ -1.88
NEFMP07197 MIR4658-201ENST00000584344 65 ntBASIC3.3□□□□□ -1.88
NEFMP07197 AL031274.2-201ENST00000599419 203 ntBASIC3.3□□□□□ -1.88
NEFMP07197 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEFMP07197 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NEFMP07197 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEFMP07197 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
NEFMP07197 RNU6-1082P-201ENST00000364574 107 ntBASIC3.29□□□□□ -1.88
NEFMP07197 RNA5SP126-201ENST00000365092 109 ntBASIC3.29□□□□□ -1.88
NEFMP07197 SNORA72-201ENST00000384339 132 ntBASIC3.29□□□□□ -1.88
NEFMP07197 EEF1B2P7-201ENST00000451177 676 ntBASIC3.29□□□□□ -1.88
NEFMP07197 AC016925.1-201ENST00000458303 298 ntBASIC3.29□□□□□ -1.88
NEFMP07197 AC010531.2-201ENST00000465012 153 ntBASIC3.29□□□□□ -1.88
NEFMP07197 ATP5EP1-201ENST00000510257 156 ntBASIC3.29□□□□□ -1.88
NEFMP07197 RNA5SP24-201ENST00000516478 95 ntBASIC3.29□□□□□ -1.88
NEFMP07197 RNU2-34P-201ENST00000516534 121 ntBASIC3.29□□□□□ -1.88
NEFMP07197 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.29□□□□□ -1.88
NEFMP07197 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NEFMP07197 RNA5SP456-201ENST00000364002 114 ntBASIC3.28□□□□□ -1.88
NEFMP07197 RNU6-944P-201ENST00000364023 107 ntBASIC3.28□□□□□ -1.88
NEFMP07197 RNU6-476P-201ENST00000384726 107 ntBASIC3.28□□□□□ -1.88
NEFMP07197 AC016717.1-201ENST00000448918 286 ntBASIC3.28□□□□□ -1.88
NEFMP07197 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.28□□□□□ -1.88
NEFMP07197 RNU7-107P-201ENST00000459121 61 ntBASIC3.28□□□□□ -1.88
NEFMP07197 RNU6-1299P-201ENST00000516316 100 ntBASIC3.28□□□□□ -1.88
NEFMP07197 RNU6-586P-201ENST00000517265 104 ntBASIC3.28□□□□□ -1.88
NEFMP07197 AC025647.1-201ENST00000517879 253 ntBASIC3.28□□□□□ -1.88
NEFMP07197 AC027419.1-201ENST00000522976 328 ntBASIC3.28□□□□□ -1.88
NEFMP07197 MIR2681-201ENST00000581814 105 ntBASIC3.28□□□□□ -1.88
NEFMP07197 MIR4435-1-201ENST00000582552 80 ntBASIC3.28□□□□□ -1.88
NEFMP07197 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.28□□□□□ -1.88
NEFMP07197 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NEFMP07197 RNU4-82P-201ENST00000362443 140 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RNY1P11-201ENST00000363759 113 ntBASIC3.27□□□□□ -1.89
NEFMP07197 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.27□□□□□ -1.89
NEFMP07197 RNU6-484P-201ENST00000384016 107 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RNU6-301P-201ENST00000384277 107 ntBASIC3.27□□□□□ -1.89
NEFMP07197 AL359511.1-201ENST00000402970 211 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RNU6-1328P-201ENST00000410938 106 ntBASIC3.27□□□□□ -1.89
NEFMP07197 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.27□□□□□ -1.89
NEFMP07197 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.27□□□□□ -1.89
NEFMP07197 AC023449.1-201ENST00000454464 154 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RNU7-26P-201ENST00000458980 63 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RN7SL429P-201ENST00000479090 223 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RN7SL489P-201ENST00000486185 223 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RN7SL327P-201ENST00000488659 223 ntBASIC3.27□□□□□ -1.89
NEFMP07197 SNORA31.11-201ENST00000516528 139 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RNU6-63P-201ENST00000516690 95 ntBASIC3.27□□□□□ -1.89
NEFMP07197 SCARNA11.3-201ENST00000517276 130 ntBASIC3.27□□□□□ -1.89
NEFMP07197 AC015720.1-201ENST00000565251 277 ntBASIC3.27□□□□□ -1.89
NEFMP07197 RN7SL853P-201ENST00000617250 223 ntBASIC3.27□□□□□ -1.89
NEFMP07197 MIR7515-201ENST00000637837 67 ntBASIC3.27□□□□□ -1.89
NEFMP07197 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NEFMP07197 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NEFMP07197 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
NEFMP07197 RNU6-978P-201ENST00000364371 103 ntBASIC3.26□□□□□ -1.89
NEFMP07197 RNU6-117P-201ENST00000365415 107 ntBASIC3.26□□□□□ -1.89
NEFMP07197 RNU6-438P-201ENST00000365561 103 ntBASIC3.26□□□□□ -1.89
NEFMP07197 RNA5SP511-201ENST00000410487 115 ntBASIC3.26□□□□□ -1.89
NEFMP07197 RNA5SP153-201ENST00000516498 76 ntBASIC3.26□□□□□ -1.89
NEFMP07197 Y_RNA.692-201ENST00000516627 105 ntBASIC3.26□□□□□ -1.89
NEFMP07197 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.26□□□□□ -1.89
NEFMP07197 CYCSP26-201ENST00000534107 320 ntBASIC3.26□□□□□ -1.89
NEFMP07197 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NEFMP07197 Y_RNA.120-201ENST00000363304 110 ntBASIC3.25□□□□□ -1.89
NEFMP07197 RNU6-1240P-201ENST00000365155 104 ntBASIC3.25□□□□□ -1.89
NEFMP07197 RNU6-1144P-201ENST00000384247 104 ntBASIC3.25□□□□□ -1.89
NEFMP07197 MIR524-201ENST00000385242 87 ntBASIC3.25□□□□□ -1.89
NEFMP07197 AL158823.1-201ENST00000418441 478 ntBASIC3.25□□□□□ -1.89
NEFMP07197 AC011753.1-201ENST00000451001 220 ntBASIC3.25□□□□□ -1.89
NEFMP07197 AC090515.1-201ENST00000465295 476 ntBASIC3.25□□□□□ -1.89
NEFMP07197 RPS27P22-201ENST00000478056 241 ntBASIC3.25□□□□□ -1.89
NEFMP07197 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.25□□□□□ -1.89
NEFMP07197 AL049861.1-201ENST00000603130 150 ntBASIC3.25□□□□□ -1.89
NEFMP07197 RPL30P4-201ENST00000429309 333 ntBASIC3.24□□□□□ -1.89
NEFMP07197 AL357134.1-201ENST00000445848 426 ntBASIC3.24□□□□□ -1.89
NEFMP07197 AC080013.2-201ENST00000460866 323 ntBASIC3.24□□□□□ -1.89
NEFMP07197 PDCD5P2-201ENST00000507570 312 ntBASIC3.24□□□□□ -1.89
NEFMP07197 RNU6-126P-201ENST00000516685 103 ntBASIC3.24□□□□□ -1.89
NEFMP07197 AC013412.1-201ENST00000610687 192 ntBASIC3.24□□□□□ -1.89
NEFMP07197 U6.95-201ENST00000636931 70 ntBASIC3.24□□□□□ -1.89
NEFMP07197 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NEFMP07197 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
NEFMP07197 RNU1-72P-201ENST00000362976 153 ntBASIC3.23□□□□□ -1.89
NEFMP07197 SNORD114-30-201ENST00000364448 72 ntBASIC3.23□□□□□ -1.89
NEFMP07197 RNU6-418P-201ENST00000384035 107 ntBASIC3.23□□□□□ -1.89
NEFMP07197 RNU1-52P-201ENST00000384190 164 ntBASIC3.23□□□□□ -1.89
NEFMP07197 SNORA26-201ENST00000391286 122 ntBASIC3.23□□□□□ -1.89
NEFMP07197 RNA5SP508-201ENST00000411327 119 ntBASIC3.23□□□□□ -1.89
NEFMP07197 SNORD77.4-201ENST00000516158 81 ntBASIC3.23□□□□□ -1.89
NEFMP07197 RNA5SP82-201ENST00000516707 92 ntBASIC3.23□□□□□ -1.89
NEFMP07197 uc_338.4-201ENST00000616635 176 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 273.4 ms