Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC024995.1-201ENST00000523014 93 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AC072026.1-201ENST00000605023 201 ntBASIC2.29□□□□□ -2.04
VPS4BO75351 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
VPS4BO75351 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
VPS4BO75351 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS4BO75351 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS4BO75351 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS4BO75351 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
VPS4BO75351 RNU6-23P-201ENST00000363283 107 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 RNU6-674P-201ENST00000363831 107 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 Y_RNA.308-201ENST00000365043 101 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 RNA5SP467-201ENST00000391274 118 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 HSPE1P21-201ENST00000438283 308 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS4BO75351 AC117454.1-201ENST00000491120 168 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AC107393.1-201ENST00000512403 346 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AP002392.1-201ENST00000537692 208 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AC091178.2-201ENST00000584401 117 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AC005786.1-201ENST00000588553 154 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 POLR3GP1-201ENST00000594073 261 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.28□□□□□ -2.04
VPS4BO75351 MIR6873-201ENST00000622788 63 ntBASIC2.28□□□□□ -2.04
VPS4BO75351 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.05
VPS4BO75351 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
VPS4BO75351 RNU6-1205P-201ENST00000363625 106 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 RNU6-682P-201ENST00000363843 106 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 SNORA72-201ENST00000384339 132 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 SNORA36B-201ENST00000410438 131 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 RPS4XP11-201ENST00000446897 772 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.27□□□□□ -2.05
VPS4BO75351 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.27□□□□□ -2.05
VPS4BO75351 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.27□□□□□ -2.05
VPS4BO75351 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS4BO75351 SNORD114-1-201ENST00000362705 72 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 RNU6-862P-201ENST00000362804 105 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 Y_RNA.121-201ENST00000363309 113 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 Y_RNA.180-201ENST00000363867 113 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 RNU6-923P-201ENST00000364753 107 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 RNU6-886P-201ENST00000384319 105 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 SNORA8.3-201ENST00000384679 139 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 RNU6-381P-201ENST00000391259 108 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 PCNPP3-201ENST00000393579 471 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 COX6CP10-201ENST00000416832 224 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 BX510359.4-201ENST00000423750 193 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.26□□□□□ -2.05
VPS4BO75351 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 AC026436.1-201ENST00000510537 270 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 AC021269.2-201ENST00000532318 330 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 Y_RNA.802-201ENST00000614892 130 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.26□□□□□ -2.05
VPS4BO75351 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS4BO75351 AC005336.3-201ENST00000623833 2679 ntBASIC2.26□□□□□ -2.05
VPS4BO75351 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VPS4BO75351 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VPS4BO75351 SNORA33-201ENST00000363664 130 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 Y_RNA.233-201ENST00000364407 101 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 RNU4-17P-201ENST00000365598 141 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 MIR518A2-201ENST00000384966 87 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 RNU11-5P-201ENST00000391216 129 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 RNU6-493P-201ENST00000391321 108 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.25□□□□□ -2.05
VPS4BO75351 RPL23AP42-201ENST00000471152 471 ntBASIC2.25□□□□□ -2.05
VPS4BO75351 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.25□□□□□ -2.05
VPS4BO75351 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS4BO75351 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VPS4BO75351 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS4BO75351 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
VPS4BO75351 AC100821.1-201ENST00000523153 2479 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 snoU2_19.4-201ENST00000364329 80 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 SNORA6-201ENST00000384033 151 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 RNU6-376P-201ENST00000384731 106 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 MIR520G-201ENST00000385064 90 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 RNA5SP465-201ENST00000391195 109 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 MIR1278-201ENST00000408753 81 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 RNU6-1186P-201ENST00000410429 97 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.24□□□□□ -2.05
VPS4BO75351 RNU1-142P-201ENST00000516682 145 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 AC073413.2-201ENST00000604332 360 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 AC103810.6-201ENST00000606708 136 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 U6.106-201ENST00000636360 105 ntBASIC2.24□□□□□ -2.05
VPS4BO75351 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
VPS4BO75351 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.24□□□□□ -2.05
VPS4BO75351 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VPS4BO75351 Y_RNA.7-201ENST00000362352 102 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 SNORD115-3-201ENST00000363100 82 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RNU4-13P-201ENST00000364019 141 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 RNU4-10P-201ENST00000364383 140 ntBASIC2.23□□□□□ -2.05
VPS4BO75351 Y_RNA.240-201ENST00000364469 95 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms