Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
PEX1O43933 SNORA25B-201ENST00000365507 128 ntBASIC2.34□□□□□ -2.03
PEX1O43933 Y_RNA.400-201ENST00000383963 111 ntBASIC2.34□□□□□ -2.03
PEX1O43933 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
PEX1O43933 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
PEX1O43933 RN7SL429P-201ENST00000479090 223 ntBASIC2.34□□□□□ -2.03
PEX1O43933 RN7SL489P-201ENST00000486185 223 ntBASIC2.34□□□□□ -2.03
PEX1O43933 RN7SL327P-201ENST00000488659 223 ntBASIC2.34□□□□□ -2.03
PEX1O43933 AC079804.2-201ENST00000490376 200 ntBASIC2.34□□□□□ -2.03
PEX1O43933 AC097462.1-201ENST00000514125 324 ntBASIC2.34□□□□□ -2.03
PEX1O43933 RN7SL853P-201ENST00000617250 223 ntBASIC2.34□□□□□ -2.03
PEX1O43933 AL449363.1-201ENST00000617815 186 ntBASIC2.34□□□□□ -2.03
PEX1O43933 MTND1P7-201ENST00000632801 297 ntBASIC2.34□□□□□ -2.03
PEX1O43933 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PEX1O43933 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PEX1O43933 RNU6-151P-201ENST00000364158 107 ntBASIC2.33□□□□□ -2.04
PEX1O43933 Y_RNA.215-201ENST00000364204 112 ntBASIC2.33□□□□□ -2.04
PEX1O43933 SNORD114-6-201ENST00000364393 72 ntBASIC2.33□□□□□ -2.04
PEX1O43933 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX1O43933 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.33□□□□□ -2.04
PEX1O43933 RPS4XP11-201ENST00000446897 772 ntBASIC2.33□□□□□ -2.04
PEX1O43933 RNU6-437P-201ENST00000459408 95 ntBASIC2.33□□□□□ -2.04
PEX1O43933 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
PEX1O43933 AL929325.1-201ENST00000603096 117 ntBASIC2.33□□□□□ -2.04
PEX1O43933 Y_RNA.778-201ENST00000620203 90 ntBASIC2.33□□□□□ -2.04
PEX1O43933 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
PEX1O43933 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PEX1O43933 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.33□□□□□ -2.04
PEX1O43933 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
PEX1O43933 MIR15B-201ENST00000385045 98 ntBASIC2.32□□□□□ -2.04
PEX1O43933 HMGN2P34-201ENST00000437647 269 ntBASIC2.32□□□□□ -2.04
PEX1O43933 AL121914.1-201ENST00000450188 156 ntBASIC2.32□□□□□ -2.04
PEX1O43933 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
PEX1O43933 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
PEX1O43933 SNORA4.4-201ENST00000515921 135 ntBASIC2.32□□□□□ -2.04
PEX1O43933 RNU7-116P-201ENST00000516940 62 ntBASIC2.32□□□□□ -2.04
PEX1O43933 RNU7-172P-201ENST00000517125 64 ntBASIC2.32□□□□□ -2.04
PEX1O43933 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.32□□□□□ -2.04
PEX1O43933 U6.73-201ENST00000619194 103 ntBASIC2.32□□□□□ -2.04
PEX1O43933 CTSLP2-204ENST00000629029 392 ntBASIC2.32□□□□□ -2.04
PEX1O43933 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
PEX1O43933 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RNU6-674P-201ENST00000363831 107 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RNU6-417P-201ENST00000384712 107 ntBASIC2.31□□□□□ -2.04
PEX1O43933 Y_RNA.568-201ENST00000384742 113 ntBASIC2.31□□□□□ -2.04
PEX1O43933 MIR569-201ENST00000385228 96 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RNU6-1228P-201ENST00000391014 107 ntBASIC2.31□□□□□ -2.04
PEX1O43933 MIR1262-201ENST00000408276 93 ntBASIC2.31□□□□□ -2.04
PEX1O43933 AC006461.1-201ENST00000412637 326 ntBASIC2.31□□□□□ -2.04
PEX1O43933 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX1O43933 AC011406.1-201ENST00000512440 370 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RNU6-426P-201ENST00000516464 97 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RNU7-128P-201ENST00000517247 62 ntBASIC2.31□□□□□ -2.04
PEX1O43933 AL021707.8-201ENST00000609428 183 ntBASIC2.31□□□□□ -2.04
PEX1O43933 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PEX1O43933 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
PEX1O43933 SNORA33-201ENST00000363664 130 ntBASIC2.3□□□□□ -2.04
PEX1O43933 RNU4-13P-201ENST00000364019 141 ntBASIC2.3□□□□□ -2.04
PEX1O43933 RNU6-81P-201ENST00000365608 104 ntBASIC2.3□□□□□ -2.04
PEX1O43933 SNORA72-201ENST00000384339 132 ntBASIC2.3□□□□□ -2.04
PEX1O43933 Y_RNA.488-201ENST00000384403 102 ntBASIC2.3□□□□□ -2.04
PEX1O43933 RN7SKP101-201ENST00000411376 320 ntBASIC2.3□□□□□ -2.04
PEX1O43933 AC245102.2-201ENST00000448956 180 ntBASIC2.3□□□□□ -2.04
PEX1O43933 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.3□□□□□ -2.04
PEX1O43933 AC008413.1-201ENST00000511864 177 ntBASIC2.3□□□□□ -2.04
PEX1O43933 AC107027.2-201ENST00000512197 115 ntBASIC2.3□□□□□ -2.04
PEX1O43933 RNU6-1041P-201ENST00000516254 102 ntBASIC2.3□□□□□ -2.04
PEX1O43933 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
PEX1O43933 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.3□□□□□ -2.04
PEX1O43933 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.3□□□□□ -2.04
PEX1O43933 ZNF702P-202ENST00000434269 1966 ntBASIC2.3□□□□□ -2.04
PEX1O43933 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PEX1O43933 RNU1-96P-201ENST00000364163 162 ntBASIC2.29□□□□□ -2.04
PEX1O43933 RNU4-41P-201ENST00000364426 143 ntBASIC2.29□□□□□ -2.04
PEX1O43933 RNU4-11P-201ENST00000365287 132 ntBASIC2.29□□□□□ -2.04
PEX1O43933 RNA5SP37-201ENST00000365420 130 ntBASIC2.29□□□□□ -2.04
PEX1O43933 RNU6-643P-201ENST00000384018 107 ntBASIC2.29□□□□□ -2.04
PEX1O43933 Y_RNA.497-201ENST00000384447 98 ntBASIC2.29□□□□□ -2.04
PEX1O43933 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
PEX1O43933 RNA5SP467-201ENST00000391274 118 ntBASIC2.29□□□□□ -2.04
PEX1O43933 MIR1253-201ENST00000408273 105 ntBASIC2.29□□□□□ -2.04
PEX1O43933 MIR548I2-201ENST00000408348 149 ntBASIC2.29□□□□□ -2.04
PEX1O43933 Y_RNA.622-201ENST00000411091 108 ntBASIC2.29□□□□□ -2.04
PEX1O43933 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.29□□□□□ -2.04
PEX1O43933 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.29□□□□□ -2.04
PEX1O43933 SNRPGP8-201ENST00000454064 226 ntBASIC2.29□□□□□ -2.04
PEX1O43933 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.29□□□□□ -2.04
PEX1O43933 AC091544.4-201ENST00000555268 342 ntBASIC2.29□□□□□ -2.04
PEX1O43933 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
PEX1O43933 AP001485.1-201ENST00000604799 199 ntBASIC2.29□□□□□ -2.04
PEX1O43933 U6.108-201ENST00000637764 58 ntBASIC2.29□□□□□ -2.04
PEX1O43933 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PEX1O43933 snoU2-30.2-201ENST00000362805 70 ntBASIC2.28□□□□□ -2.04
PEX1O43933 RNY1P11-201ENST00000363759 113 ntBASIC2.28□□□□□ -2.04
PEX1O43933 SNORD45.3-201ENST00000363836 72 ntBASIC2.28□□□□□ -2.04
PEX1O43933 RNU6-376P-201ENST00000384731 106 ntBASIC2.28□□□□□ -2.04
PEX1O43933 Y_RNA.587-201ENST00000391210 103 ntBASIC2.28□□□□□ -2.04
PEX1O43933 RNU6-1186P-201ENST00000410429 97 ntBASIC2.28□□□□□ -2.04
PEX1O43933 NDUFA5P6-201ENST00000542110 379 ntBASIC2.28□□□□□ -2.04
PEX1O43933 DNAJC19P2-201ENST00000593340 302 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms