Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 SNORD3E-202ENST00000627253 216 ntBASIC2.04□□□□□ -2.08
TSPAN6O43657 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TSPAN6O43657 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TSPAN6O43657 Y_RNA.84-201ENST00000363011 104 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 Y_RNA.162-201ENST00000363683 102 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 RNU6-1080P-201ENST00000383982 107 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 MIR215-201ENST00000384858 110 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 MIR513A1-201ENST00000385138 129 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 MIR1289-2-201ENST00000408360 111 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 RNU2-2P-201ENST00000410396 191 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 AL139156.1-201ENST00000412785 841 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.03□□□□□ -2.08
TSPAN6O43657 OR9P1P-201ENST00000496431 281 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 RNU6-327P-201ENST00000516270 127 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.03□□□□□ -2.08
TSPAN6O43657 AC136443.5-201ENST00000603741 370 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.03□□□□□ -2.08
TSPAN6O43657 Y_RNA.783-201ENST00000613546 102 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 AC095038.3-201ENST00000634439 195 ntBASIC2.03□□□□□ -2.08
TSPAN6O43657 WWP1P1-201ENST00000466609 2769 ntBASIC2.03□□□□□ -2.09
TSPAN6O43657 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
TSPAN6O43657 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
TSPAN6O43657 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
TSPAN6O43657 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
TSPAN6O43657 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TSPAN6O43657 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.02□□□□□ -2.09
TSPAN6O43657 Y_RNA.574-201ENST00000384766 95 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 MIR660-201ENST00000385235 97 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 MTATP8P1-201ENST00000467115 207 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 RNU7-115P-201ENST00000516433 55 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 AL117187.1-201ENST00000555482 181 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 AC015688.6-201ENST00000577737 104 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
TSPAN6O43657 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TSPAN6O43657 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
TSPAN6O43657 Y_RNA.26-201ENST00000362539 101 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNU6-238P-201ENST00000363313 106 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 Y_RNA.149-201ENST00000363558 117 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNA5SP259-201ENST00000365541 109 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNU6-338P-201ENST00000383888 105 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 SNORA72.4-201ENST00000384174 132 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 MIR1302-6-201ENST00000408466 90 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNU6-1203P-201ENST00000410703 110 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AC104332.1-201ENST00000440471 797 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 TRBVB-201ENST00000477100 408 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RPL23AP54-201ENST00000495129 419 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AC079140.2-201ENST00000506193 142 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNA5SP168-201ENST00000516642 112 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 RNU6-570P-201ENST00000517051 105 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AC024405.2-202ENST00000532731 184 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AC008269.2-201ENST00000561915 1105 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AC127455.1-201ENST00000565496 145 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 DEFB122-202ENST00000569013 197 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 MIR3124-201ENST00000582636 67 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 AL078604.3-201ENST00000615580 211 ntBASIC2.01□□□□□ -2.09
TSPAN6O43657 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.01□□□□□ -2.09
TSPAN6O43657 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2□□□□□ -2.09
TSPAN6O43657 SNORD68-201ENST00000363214 84 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU6-899P-201ENST00000363947 107 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU4-41P-201ENST00000364426 143 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU6-424P-201ENST00000384367 105 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU6-1065P-201ENST00000384513 106 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU1-78P-201ENST00000391248 165 ntBASIC2□□□□□ -2.09
TSPAN6O43657 MIR548F4-201ENST00000408515 105 ntBASIC2□□□□□ -2.09
TSPAN6O43657 AC117454.1-201ENST00000491120 168 ntBASIC2□□□□□ -2.09
TSPAN6O43657 SERF1AP1-201ENST00000514575 187 ntBASIC2□□□□□ -2.09
TSPAN6O43657 RNU6-1045P-201ENST00000516321 107 ntBASIC2□□□□□ -2.09
TSPAN6O43657 MIR2681-201ENST00000581814 105 ntBASIC2□□□□□ -2.09
TSPAN6O43657 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2□□□□□ -2.09
TSPAN6O43657 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
TSPAN6O43657 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
TSPAN6O43657 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TSPAN6O43657 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
TSPAN6O43657 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.99□□□□□ -2.09
TSPAN6O43657 RNA5SP182-201ENST00000516064 82 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 RNU6-1338P-201ENST00000516328 91 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 SCARNA15.1-201ENST00000516384 125 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 MIR8062-201ENST00000621515 85 ntBASIC1.99□□□□□ -2.09
TSPAN6O43657 MIR126-201ENST00000362291 85 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 U8.7-201ENST00000364940 136 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 SNORA12.1-201ENST00000390873 148 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 RPL31P63-201ENST00000422565 375 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 CALM2P4-201ENST00000430810 426 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AL135790.2-201ENST00000437701 267 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AC245517.4-201ENST00000448601 281 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 RNU7-141P-201ENST00000459304 62 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AC025033.1-201ENST00000463883 194 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 HMGN1P7-201ENST00000491722 313 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AC091959.1-201ENST00000495857 238 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 CYCTP-201ENST00000504253 315 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 RNU7-12P-201ENST00000516030 62 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
TSPAN6O43657 JPX_2.1-201ENST00000614161 69 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 AL591926.4-201ENST00000616895 298 ntBASIC1.98□□□□□ -2.09
TSPAN6O43657 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.98□□□□□ -2.09
TSPAN6O43657 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms