Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.05□□□□□ -1.44
MSH5O43196 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
MSH5O43196 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC6.04□□□□□ -1.44
MSH5O43196 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.04□□□□□ -1.44
MSH5O43196 RN7SL441P-201ENST00000492388 296 ntBASIC6.04□□□□□ -1.44
MSH5O43196 MIR5699-201ENST00000578903 90 ntBASIC6.04□□□□□ -1.44
MSH5O43196 AL662814.1-201ENST00000617364 121 ntBASIC6.04□□□□□ -1.44
MSH5O43196 MIR8054-201ENST00000620877 86 ntBASIC6.04□□□□□ -1.44
MSH5O43196 AC140479.6-201ENST00000633535 357 ntBASIC6.04□□□□□ -1.44
MSH5O43196 VPS35-212ENST00000640313 141 ntTSL 5 BASIC6.04□□□□□ -1.44
MSH5O43196 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
MSH5O43196 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC6.04□□□□□ -1.44
MSH5O43196 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
MSH5O43196 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.03□□□□□ -1.44
MSH5O43196 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
MSH5O43196 SNORA62.3-201ENST00000365110 153 ntBASIC6.03□□□□□ -1.44
MSH5O43196 RNU6-382P-201ENST00000365181 106 ntBASIC6.03□□□□□ -1.44
MSH5O43196 RNU6-628P-201ENST00000410675 107 ntBASIC6.03□□□□□ -1.44
MSH5O43196 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.03□□□□□ -1.44
MSH5O43196 RPL12P50-201ENST00000603116 116 ntBASIC6.03□□□□□ -1.44
MSH5O43196 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
MSH5O43196 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
MSH5O43196 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
MSH5O43196 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSH5O43196 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSH5O43196 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
MSH5O43196 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
MSH5O43196 MIR448-201ENST00000362131 111 ntBASIC6.02□□□□□ -1.45
MSH5O43196 RNU6-664P-201ENST00000362381 107 ntBASIC6.02□□□□□ -1.45
MSH5O43196 Y_RNA.224-201ENST00000364308 111 ntBASIC6.02□□□□□ -1.45
MSH5O43196 SNORA11F-201ENST00000408237 128 ntBASIC6.02□□□□□ -1.45
MSH5O43196 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC6.02□□□□□ -1.45
MSH5O43196 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSH5O43196 AC244505.7-201ENST00000599675 272 ntBASIC6.02□□□□□ -1.45
MSH5O43196 AL078603.1-201ENST00000603824 313 ntBASIC6.02□□□□□ -1.45
MSH5O43196 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
MSH5O43196 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
MSH5O43196 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.02□□□□□ -1.45
MSH5O43196 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
MSH5O43196 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC6.01□□□□□ -1.45
MSH5O43196 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
MSH5O43196 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.01□□□□□ -1.45
MSH5O43196 AC019129.1-201ENST00000403786 261 ntBASIC6.01□□□□□ -1.45
MSH5O43196 SNORD63B-201ENST00000411005 70 ntBASIC6.01□□□□□ -1.45
MSH5O43196 AL606490.4-201ENST00000423117 127 ntBASIC6.01□□□□□ -1.45
MSH5O43196 RPS29P17-201ENST00000430795 166 ntBASIC6.01□□□□□ -1.45
MSH5O43196 AC011998.1-201ENST00000433403 117 ntBASIC6.01□□□□□ -1.45
MSH5O43196 SNORA74C-1-201ENST00000580726 201 ntBASIC6.01□□□□□ -1.45
MSH5O43196 MIR4696-201ENST00000581431 70 ntBASIC6.01□□□□□ -1.45
MSH5O43196 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH5O43196 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH5O43196 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MSH5O43196 AC131280.1-202ENST00000624067 4211 ntBASIC6.01□□□□□ -1.45
MSH5O43196 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH5O43196 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC6□□□□□ -1.45
MSH5O43196 MAPK10-303ENST00000641324 3959 ntBASIC6□□□□□ -1.45
MSH5O43196 AC092435.4-201ENST00000623012 4159 ntBASIC6□□□□□ -1.45
MSH5O43196 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MSH5O43196 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC6□□□□□ -1.45
MSH5O43196 AC069285.2-201ENST00000440210 275 ntBASIC6□□□□□ -1.45
MSH5O43196 RNU7-12P-201ENST00000516030 62 ntBASIC6□□□□□ -1.45
MSH5O43196 SNORA67.7-201ENST00000516664 135 ntBASIC6□□□□□ -1.45
MSH5O43196 RNU11-2P-201ENST00000516898 142 ntBASIC6□□□□□ -1.45
MSH5O43196 AC100770.1-201ENST00000532310 322 ntBASIC6□□□□□ -1.45
MSH5O43196 AC121758.2-201ENST00000553271 193 ntBASIC6□□□□□ -1.45
MSH5O43196 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
MSH5O43196 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
MSH5O43196 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH5O43196 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
MSH5O43196 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH5O43196 SNORD101-201ENST00000384027 73 ntBASIC5.99□□□□□ -1.45
MSH5O43196 SNORA11.1-201ENST00000408133 129 ntBASIC5.99□□□□□ -1.45
MSH5O43196 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH5O43196 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH5O43196 RNU6-950P-201ENST00000384651 107 ntBASIC5.98□□□□□ -1.45
MSH5O43196 AC004552.1-201ENST00000419089 348 ntBASIC5.98□□□□□ -1.45
MSH5O43196 Z74021.1-201ENST00000423610 407 ntBASIC5.98□□□□□ -1.45
MSH5O43196 AC098934.3-201ENST00000430450 190 ntBASIC5.98□□□□□ -1.45
MSH5O43196 RPS26P3-201ENST00000470205 348 ntBASIC5.98□□□□□ -1.45
MSH5O43196 AC090543.2-201ENST00000483963 348 ntBASIC5.98□□□□□ -1.45
MSH5O43196 AC004057.1-201ENST00000485827 348 ntBASIC5.98□□□□□ -1.45
MSH5O43196 AC008885.1-201ENST00000514930 301 ntBASIC5.98□□□□□ -1.45
MSH5O43196 RNU6-1194P-201ENST00000516208 104 ntBASIC5.98□□□□□ -1.45
MSH5O43196 MIR3158-1-201ENST00000583596 81 ntBASIC5.98□□□□□ -1.45
MSH5O43196 TRDV1-202ENST00000621643 102 ntBASIC5.98□□□□□ -1.45
MSH5O43196 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH5O43196 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH5O43196 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MSH5O43196 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH5O43196 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH5O43196 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH5O43196 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
MSH5O43196 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MSH5O43196 LINC01355-201ENST00000566551 5444 ntBASIC5.97□□□□□ -1.45
MSH5O43196 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MSH5O43196 SPRR2C-201ENST00000290702 219 ntBASIC5.97□□□□□ -1.45
MSH5O43196 SNORA67.4-201ENST00000384688 142 ntBASIC5.97□□□□□ -1.45
MSH5O43196 MIR554-201ENST00000384874 96 ntBASIC5.97□□□□□ -1.45
MSH5O43196 RNU1-45P-201ENST00000517191 141 ntBASIC5.97□□□□□ -1.45
MSH5O43196 ZNF355P-201ENST00000427301 3216 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms