Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 AC104985.2-201ENST00000620598 500 ntBASIC1.09□□□□□ -2.23
PDLIM1O00151 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PDLIM1O00151 SNORD68-201ENST00000363214 84 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 Y_RNA.230-201ENST00000364348 109 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 Y_RNA.327-201ENST00000365201 102 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 RNU6-1080P-201ENST00000383982 107 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 Z98949.2-201ENST00000440996 144 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 AC005840.1-201ENST00000498412 377 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 RNU6-322P-201ENST00000516010 103 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 RNU6-436P-201ENST00000516171 114 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 HSPE1P19-201ENST00000603327 295 ntBASIC1.08□□□□□ -2.24
PDLIM1O00151 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDLIM1O00151 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
PDLIM1O00151 RNU6-1115P-201ENST00000362490 106 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 RNU4-73P-201ENST00000363164 141 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 RNU6-1175P-201ENST00000365200 107 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 Y_RNA.361-201ENST00000365515 120 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 RNU6-1199P-201ENST00000411249 104 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 AL160004.2-201ENST00000432935 350 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.07□□□□□ -2.24
PDLIM1O00151 RPS4XP11-201ENST00000446897 772 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 MTND3P22-201ENST00000510932 243 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 RNU6-976P-201ENST00000516086 111 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 RN7SKP295-201ENST00000517264 153 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 AC090049.2-201ENST00000550377 109 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 MIR4795-201ENST00000584182 89 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
PDLIM1O00151 AC022441.3-201ENST00000605737 136 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 Y_RNA.772-201ENST00000606692 102 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 GHRLOS.1-201ENST00000610995 70 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 AL138825.1-201ENST00000618587 192 ntBASIC1.07□□□□□ -2.24
PDLIM1O00151 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.07□□□□□ -2.24
PDLIM1O00151 Y_RNA.252-201ENST00000364556 101 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 SNORA2.2-201ENST00000365473 135 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 SNORA70.7-201ENST00000384159 133 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 RNU6-163P-201ENST00000384396 106 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 SNORD116-13-201ENST00000384408 92 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 Y_RNA.496-201ENST00000384444 101 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 RNU6-1105P-201ENST00000384774 107 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 MT-TD-201ENST00000387419 68 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 AL451046.2-201ENST00000403074 277 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 RNU6-1116P-201ENST00000517269 99 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 AC011604.1-201ENST00000545978 196 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 AL117336.2-201ENST00000602435 335 ntBASIC1.06□□□□□ -2.24
PDLIM1O00151 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.06□□□□□ -2.24
PDLIM1O00151 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
PDLIM1O00151 Y_RNA.5-201ENST00000362334 102 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 Y_RNA.80-201ENST00000362996 102 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 Y_RNA.172-201ENST00000363765 102 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 Y_RNA.329-201ENST00000365209 107 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU1-115P-201ENST00000365329 160 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU6-53P-201ENST00000365367 106 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 Y_RNA.485-201ENST00000384395 102 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 MIR653-201ENST00000385279 96 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 Y_RNA.579-201ENST00000390939 94 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU2-61P-201ENST00000411069 191 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 AC104332.1-201ENST00000440471 797 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 AL117351.2-201ENST00000513571 157 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU6-917P-201ENST00000516294 104 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU6-966P-201ENST00000516479 104 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 RNU4-77P-201ENST00000516692 156 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 MIR5188-201ENST00000583467 113 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.05□□□□□ -2.24
PDLIM1O00151 AC091925.1-201ENST00000623204 462 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 AL606534.2-204ENST00000635008 178 ntBASIC1.05□□□□□ -2.24
PDLIM1O00151 MIRLET7C-201ENST00000362160 84 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 RNY1P10-201ENST00000363268 113 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 MCFD2P1-201ENST00000417812 300 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 MLLT10P1-201ENST00000418346 262 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AF228730.4-201ENST00000421457 183 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 PIGPP3-201ENST00000425307 415 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 MTND1P14-201ENST00000427400 950 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.04□□□□□ -2.24
PDLIM1O00151 AC005042.3-201ENST00000453230 174 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.04□□□□□ -2.24
PDLIM1O00151 AC120024.3-201ENST00000603167 156 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AC005972.2-201ENST00000604690 348 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 MIR6078-201ENST00000611069 100 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AC006157.1-201ENST00000611750 366 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 AC010205.1-201ENST00000616668 449 ntBASIC1.04□□□□□ -2.24
PDLIM1O00151 Y_RNA.197-201ENST00000364004 102 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 Y_RNA.331-201ENST00000365267 102 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 Y_RNA.458-201ENST00000384240 102 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 Y_RNA.570-201ENST00000384750 101 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 MIR222-201ENST00000384992 110 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 RNU6-855P-201ENST00000410395 104 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 RNU6-710P-201ENST00000410424 105 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AL390729.2-201ENST00000416137 156 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 AL133373.1-201ENST00000497098 94 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 CYCTP-201ENST00000504253 315 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 SNORA40.14-201ENST00000516543 86 ntBASIC1.03□□□□□ -2.24
PDLIM1O00151 RNU7-110P-201ENST00000516891 62 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms