Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC188H7C350 AL160004.2-201ENST00000432935 350 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AC104332.1-201ENST00000440471 797 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 DYNLT3P2-201ENST00000442517 295 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AC004223.1-201ENST00000479840 271 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AL358944.1-201ENST00000528537 144 ntBASIC1.28□□□□□ -2.2
CCDC188H7C350 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC188H7C350 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC188H7C350 RNU6-1115P-201ENST00000362490 106 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 RNA5SP327-201ENST00000362494 101 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 RNU6-1175P-201ENST00000365200 107 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 Y_RNA.327-201ENST00000365201 102 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 MT-TD-201ENST00000387419 68 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC188H7C350 RNU5A-5P-201ENST00000411054 116 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 AL162725.1-201ENST00000435405 301 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.27□□□□□ -2.21
CCDC188H7C350 MTND3P22-201ENST00000510932 243 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 RNU6-976P-201ENST00000516086 111 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 RN7SKP295-201ENST00000517264 153 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 AC138305.3-201ENST00000624988 240 ntBASIC1.27□□□□□ -2.21
CCDC188H7C350 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC188H7C350 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC188H7C350 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 SNORD116-13-201ENST00000384408 92 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 MIR891A-201ENST00000401237 79 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 RNU6-855P-201ENST00000410395 104 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 PIGPP3-201ENST00000425307 415 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 RPS4XP11-201ENST00000446897 772 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 AC005042.3-201ENST00000453230 174 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 RNU7-152P-201ENST00000458982 64 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 AC011604.1-201ENST00000545978 196 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 AC120024.3-201ENST00000603167 156 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 AL050343.2-201ENST00000607338 280 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 GHRLOS.1-201ENST00000610995 70 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 AC104985.2-201ENST00000620598 500 ntBASIC1.26□□□□□ -2.21
CCDC188H7C350 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC188H7C350 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC188H7C350 Y_RNA.331-201ENST00000365267 102 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 Y_RNA.526-201ENST00000384572 110 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 MIR1285-1-201ENST00000408593 84 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AC022028.1-201ENST00000412054 408 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 MLLT10P1-201ENST00000418346 262 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.25□□□□□ -2.21
CCDC188H7C350 MTND1P14-201ENST00000427400 950 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 CYCTP-201ENST00000504253 315 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 RNU7-110P-201ENST00000516891 62 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AC090049.2-201ENST00000550377 109 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 MIR4795-201ENST00000584182 89 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 SNORA4-201ENST00000584302 138 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AL357312.1-201ENST00000603879 298 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 AC006157.1-201ENST00000611750 366 ntBASIC1.25□□□□□ -2.21
CCDC188H7C350 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.25□□□□□ -2.21
CCDC188H7C350 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC188H7C350 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC188H7C350 RNU4-73P-201ENST00000363164 141 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 RNY3P14-201ENST00000384309 102 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 RNU6-21P-201ENST00000384710 107 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 RNU6-710P-201ENST00000410424 105 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 AC024067.1-201ENST00000426199 223 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 AL117351.2-201ENST00000513571 157 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 RNU6-1116P-201ENST00000517269 99 ntBASIC1.24□□□□□ -2.21
CCDC188H7C350 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CCDC188H7C350 Y_RNA.329-201ENST00000365209 107 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 Y_RNA.496-201ENST00000384444 101 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 Y_RNA.579-201ENST00000390939 94 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 RNU2-61P-201ENST00000411069 191 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AL390729.2-201ENST00000416137 156 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 RNU6-1170P-201ENST00000515974 106 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AC022616.4-201ENST00000522985 181 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 MIR5188-201ENST00000583467 113 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 FAM106DP-201ENST00000586416 501 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AL117336.2-201ENST00000602435 335 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AC022441.3-201ENST00000605737 136 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AC011373.1-201ENST00000607270 237 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
CCDC188H7C350 AL606534.2-204ENST00000635008 178 ntBASIC1.23□□□□□ -2.21
CCDC188H7C350 SNORA7.1-201ENST00000363750 139 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 Y_RNA.361-201ENST00000365515 120 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC188H7C350 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 SNORA31.2-201ENST00000516019 134 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 SNORA31.4-201ENST00000516049 129 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 RNU6-436P-201ENST00000516171 114 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 RNU6-917P-201ENST00000516294 104 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.22□□□□□ -2.21
CCDC188H7C350 AC004832.4-201ENST00000608952 331 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 AL591926.4-201ENST00000616895 298 ntBASIC1.22□□□□□ -2.21
CCDC188H7C350 RNU6-1084P-201ENST00000362498 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms