Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-376P-201ENST00000384731 106 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 MIR518E-201ENST00000385252 88 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.645-201ENST00000391229 102 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RNU4-30P-201ENST00000410245 143 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RNU2-54P-201ENST00000410299 190 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RNU5A-5P-201ENST00000411054 116 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 PMCHL1-202ENST00000423102 261 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AC069257.2-201ENST00000441819 155 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RPS4XP11-201ENST00000446897 772 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AC079140.2-201ENST00000506193 142 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 RNA5SP168-201ENST00000516642 112 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 CYP3A52P-201ENST00000563326 91 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AL078603.1-201ENST00000603824 313 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AL606534.2-204ENST00000635008 178 ntBASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV40A0A0B4J280 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 MIRLET7C-201ENST00000362160 84 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.143-201ENST00000363520 106 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1175P-201ENST00000365200 107 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.329-201ENST00000365209 107 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AL590004.1-201ENST00000405321 300 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AC236972.2-201ENST00000434979 310 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 HSPE1P13-201ENST00000451143 297 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1046P-201ENST00000516538 107 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 SNORA44.1-201ENST00000517031 108 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1096P-201ENST00000517089 102 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-165P-201ENST00000517170 99 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-902P-201ENST00000517212 91 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AC136932.1-201ENST00000574771 208 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 MIR3937-201ENST00000580135 106 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 AC006435.5-201ENST00000624486 112 ntBASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV40A0A0B4J280 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.105-201ENST00000363182 111 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.148-201ENST00000363557 117 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-324P-201ENST00000363957 106 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.570-201ENST00000384750 101 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RN7SKP200-201ENST00000410564 320 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU2-61P-201ENST00000411069 191 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 MCFD2P1-201ENST00000417812 300 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 MTND4P19-201ENST00000446659 478 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RPS23P4-201ENST00000487908 423 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNA5SP445-201ENST00000515889 115 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-976P-201ENST00000516086 111 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-917P-201ENST00000516294 104 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-922P-201ENST00000516753 99 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-341P-201ENST00000516973 96 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 MIR4423-201ENST00000580922 80 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 DEFB117-201ENST00000602356 141 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 AC104695.3-201ENST00000604052 296 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 AC022441.3-201ENST00000605737 136 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 AC004832.4-201ENST00000608952 331 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 AC040896.1-201ENST00000613819 479 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 SNORD3E-202ENST00000627253 216 ntBASIC0.86□□□□□ -2.27
TRAV40A0A0B4J280 RNA5SP327-201ENST00000362494 101 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.265-201ENST00000364677 108 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.395-201ENST00000383945 109 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-424P-201ENST00000384367 105 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-102P-201ENST00000384485 104 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 MIR222-201ENST00000384992 110 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.639-201ENST00000458981 102 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 AL133373.1-201ENST00000497098 94 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-397P-201ENST00000516226 104 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 AL512310.8-201ENST00000550183 120 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 AC068647.2-201ENST00000637380 353 ntBASIC0.85□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1123P-201ENST00000362347 106 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.26-201ENST00000362539 101 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.112-201ENST00000363250 102 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1048P-201ENST00000364054 107 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU1-115P-201ENST00000365329 160 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1310P-201ENST00000384153 107 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MIR660-201ENST00000385235 97 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MT-TD-201ENST00000387419 68 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AL034345.1-201ENST00000407768 123 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 Y_RNA.604-201ENST00000410574 102 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 PIGPP3-201ENST00000425307 415 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AL162725.1-201ENST00000435405 301 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RPS29P28-201ENST00000446439 141 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-911P-201ENST00000516523 104 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RNU6-1153P-201ENST00000516760 105 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms