Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
SNCAIPQ9Y6H5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 Y_RNA.127-201ENST00000363386 109 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 MIR95-201ENST00000385072 81 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 SNORA3.2-201ENST00000408221 125 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 AC003982.1-202ENST00000469928 248 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 RPL23AP91-201ENST00000569211 455 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 ZNF861P-201ENST00000588126 639 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNCAIPQ9Y6H5 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNCAIPQ9Y6H5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNCAIPQ9Y6H5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.203-201ENST00000364106 102 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 RNA5SP205-201ENST00000364653 136 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.432-201ENST00000384087 111 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 MIR627-201ENST00000384979 97 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 SNORA75.5-201ENST00000391291 81 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.629-201ENST00000411368 105 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 RPS4XP11-201ENST00000446897 772 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 AC023449.1-201ENST00000454464 154 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1299P-201ENST00000516316 100 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 AP001328.1-201ENST00000528550 176 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 AC120024.3-201ENST00000603167 156 ntBASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.15□□□□□ -1.91
SNCAIPQ9Y6H5 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 RNY1P11-201ENST00000363759 113 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1082P-201ENST00000364574 107 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.332-201ENST00000365271 113 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 SNORD116-14-201ENST00000383894 92 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 SNORD116-17-201ENST00000383929 92 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 SNORD116-15-201ENST00000384445 92 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 SNORD116-19-201ENST00000384729 92 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 HMGN2P34-201ENST00000437647 269 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-197P-201ENST00000516680 100 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 SNORA48.11-201ENST00000517015 89 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 AC090142.3-201ENST00000519012 385 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 AC011604.1-201ENST00000545978 196 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 MIR2681-201ENST00000581814 105 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 AL356280.1-201ENST00000603614 379 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 AL021707.8-201ENST00000609428 183 ntBASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNCAIPQ9Y6H5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.81-201ENST00000362997 102 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1186P-201ENST00000410429 97 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 RNU2-55P-201ENST00000411146 174 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 RNA5SP492-201ENST00000411330 114 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 MIR3616-201ENST00000584070 92 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 U2.20-201ENST00000613956 192 ntBASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNCAIPQ9Y6H5 ZNF658B-202ENST00000615961 3375 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 RNA5SP289-201ENST00000362332 137 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1336P-201ENST00000383886 109 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 MIR561-201ENST00000385216 97 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 RNU2-48P-201ENST00000410694 191 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.621-201ENST00000411065 96 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 AC060773.1-201ENST00000421698 310 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-856P-201ENST00000516959 98 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 uc_338.4-201ENST00000616635 176 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 U6.73-201ENST00000619194 103 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 AP001340.1-201ENST00000624405 217 ntBASIC3.12□□□□□ -1.91
SNCAIPQ9Y6H5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-915P-201ENST00000364943 103 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-597P-201ENST00000365620 102 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-80P-201ENST00000384195 107 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 RNU2-70P-201ENST00000410718 179 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 AC245102.2-201ENST00000448956 180 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 RNU4-57P-201ENST00000515980 135 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 CTSLP2-204ENST00000629029 392 ntBASIC3.11□□□□□ -1.91
SNCAIPQ9Y6H5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 MIR340-201ENST00000362125 95 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-1209P-201ENST00000363655 107 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 SNORA25.7-201ENST00000364375 127 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 Y_RNA.251-201ENST00000364551 99 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-484P-201ENST00000384016 107 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 SNORD20-201ENST00000384550 80 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 RNU6-220P-201ENST00000390919 107 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 AC245047.4-201ENST00000433189 144 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 snoU13.26-201ENST00000459452 105 ntBASIC3.1□□□□□ -1.91
SNCAIPQ9Y6H5 UBL5P3-201ENST00000475112 231 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms