Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 MIR518A2-201ENST00000384966 87 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 RNU11-3P-201ENST00000391111 133 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 HMGN2P39-201ENST00000398005 273 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 RNU2-55P-201ENST00000411146 174 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 SEPT7P4-201ENST00000437076 306 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 AC023449.1-201ENST00000454464 154 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 AC012640.5-201ENST00000623897 319 ntBASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.170-201ENST00000363746 110 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.796-201ENST00000364268 102 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.799-201ENST00000364992 102 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNY1P5-201ENST00000383890 115 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNU6-804P-201ENST00000384286 107 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNU6-239P-201ENST00000390990 99 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 MIR1283-2-201ENST00000408621 87 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNU4-43P-201ENST00000410628 137 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 AL121914.1-201ENST00000450188 156 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNA5SP367-201ENST00000516557 118 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 AC005000.2-201ENST00000605468 310 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 AC104465.1-201ENST00000611365 139 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
PCDHA9Q9Y5H5 RNU6-1209P-201ENST00000363655 107 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.621-201ENST00000411065 96 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC107083.1-201ENST00000439643 279 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AL392103.1-201ENST00000447000 198 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC233266.1-201ENST00000454518 96 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 RNU6-1291P-201ENST00000516591 104 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 RNU7-121P-201ENST00000516604 62 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.703-201ENST00000516846 111 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AP002004.2-201ENST00000531656 154 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC079600.2-201ENST00000550076 130 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 RPL23AP91-201ENST00000569211 455 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC242852.1-201ENST00000612151 96 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC244015.1-201ENST00000622301 99 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
PCDHA9Q9Y5H5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.267-201ENST00000364679 109 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.506-201ENST00000384494 102 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 MIR15B-201ENST00000385045 98 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.587-201ENST00000391210 103 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 MTND2P29-201ENST00000438595 412 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 SNORD11-201ENST00000459124 84 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 HMGN1P7-201ENST00000491722 313 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 RNU7-200P-201ENST00000516105 62 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 AC006023.1-201ENST00000603944 259 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 AC069114.2-201ENST00000604699 304 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 AC245060.5-201ENST00000610778 3293 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 JPX_2.1-201ENST00000614161 69 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 uc_338.4-201ENST00000616635 176 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 MTND1P7-201ENST00000632801 297 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 AC007336.1-201ENST00000576365 3828 ntBASIC2.55□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.398-201ENST00000383952 99 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 RNA5SP270-201ENST00000411361 118 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 AC069257.2-201ENST00000441819 155 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 AC107027.2-201ENST00000512197 115 ntBASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHA9Q9Y5H5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 Y_RNA.8-201ENST00000362353 102 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 RNU6-449P-201ENST00000383914 107 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 RNU6-125P-201ENST00000384505 107 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 MIR597-201ENST00000384968 97 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 RNA5SP210-201ENST00000391034 120 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 SNRPGP8-201ENST00000454064 226 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 AL049830.1-201ENST00000468034 425 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 RNU6-561P-201ENST00000516222 102 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 MIR3133-201ENST00000583157 78 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 AL049861.1-201ENST00000603130 150 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 AC022217.4-201ENST00000604389 163 ntBASIC2.53□□□□□ -2
PCDHA9Q9Y5H5 SNORD14A-201ENST00000606526 91 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms