Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-60P-201ENST00000364792 103 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 SNORA4.2-201ENST00000365313 147 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 SNORA22B-201ENST00000383876 138 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-440P-201ENST00000390882 105 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 HSPE1P13-201ENST00000451143 297 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 AL929325.1-201ENST00000603096 117 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 AL359821.1-201ENST00000605519 182 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 MIR8054-201ENST00000620877 86 ntBASIC1.75□□□□□ -2.13
KDM3AQ9Y4C1 WWP1P1-201ENST00000466609 2769 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 RNU4-13P-201ENST00000364019 141 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 SNORD63-201ENST00000384262 68 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 RPS27P1-201ENST00000450552 247 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 AL356055.1-201ENST00000602528 446 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 AL645939.4-201ENST00000604495 135 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 AP000648.3-201ENST00000623539 4507 ntBASIC1.74□□□□□ -2.13
KDM3AQ9Y4C1 MIR424-201ENST00000362227 98 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.152-201ENST00000363578 100 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.380-201ENST00000365663 111 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 MIR517C-201ENST00000385103 95 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AC005534.2-201ENST00000431047 433 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AL606517.2-201ENST00000442855 241 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AC091021.1-201ENST00000468051 388 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-341P-201ENST00000516973 96 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 AC016925.2-201ENST00000605108 242 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KDM3AQ9Y4C1 ICE2P2-201ENST00000483823 2787 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.158-201ENST00000363651 101 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 Y_RNA.361-201ENST00000365515 120 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-937P-201ENST00000384325 106 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-136P-201ENST00000384663 107 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-823P-201ENST00000391042 103 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 MIR1252-201ENST00000408861 65 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 SEPT14P8-201ENST00000508026 178 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-436P-201ENST00000516171 114 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 SNORA40.15-201ENST00000516884 107 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 MIR4423-201ENST00000580922 80 ntBASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
KDM3AQ9Y4C1 RNY1P10-201ENST00000363268 113 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 RNU1-42P-201ENST00000364033 160 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-450P-201ENST00000364654 107 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.329-201ENST00000365209 107 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.645-201ENST00000391229 102 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 RNU7-28P-201ENST00000516759 62 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AC020661.2-201ENST00000560114 134 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AC104695.3-201ENST00000604052 296 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 SNORD113-5-201ENST00000607261 78 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AL021879.1-201ENST00000611756 288 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 MIR8063-201ENST00000621930 81 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.455-201ENST00000384230 98 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 RNU2-61P-201ENST00000411069 191 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 STAG3L5P-204ENST00000443759 179 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-397P-201ENST00000516226 104 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-63P-201ENST00000516690 95 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 MIR8070-201ENST00000616510 88 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 MIR376A1-201ENST00000616574 68 ntBASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 SNORD33-201ENST00000362761 85 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU4-76P-201ENST00000364509 141 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-117P-201ENST00000365415 107 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-639P-201ENST00000384074 107 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 SNORA67.6-201ENST00000391093 99 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 RNU4-30P-201ENST00000410245 143 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.69□□□□□ -2.14
KDM3AQ9Y4C1 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms