Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 RPS29P21-201ENST00000496272 170 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 AC096725.1-201ENST00000514266 313 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 RNU6-126P-201ENST00000516685 103 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 AC011604.1-201ENST00000545978 196 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 AC105245.1-201ENST00000581934 244 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 AC002064.3-201ENST00000623448 346 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 RNU6-755P-201ENST00000364400 103 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 AL603914.1-201ENST00000401964 204 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 AC009969.1-201ENST00000438726 172 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 RNU6-1061P-201ENST00000516530 99 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 MIR7157-201ENST00000635801 60 ntBASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.51□□□□□ -1.85
RTCBQ9Y3I0 MAPK10-322ENST00000641485 4530 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 SNORA22-201ENST00000383907 134 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 MIR562-201ENST00000384894 95 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 RNU2-32P-201ENST00000411193 191 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 MTCO1P44-201ENST00000441935 243 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 Y_RNA.690-201ENST00000516603 95 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 SCARNA3-201ENST00000517097 143 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 MIR4662B-201ENST00000579498 81 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 AC108081.1-201ENST00000604358 221 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 Pinc.1-201ENST00000616452 154 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 MIR7843-201ENST00000622274 79 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 AC080128.1-201ENST00000474389 1917 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 MAPK10-362ENST00000641864 4484 ntBASIC3.5□□□□□ -1.85
RTCBQ9Y3I0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 RNA5SP139-201ENST00000364340 117 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 MIR218-1-201ENST00000384999 110 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 RNU6-1328P-201ENST00000410938 106 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 OR9P1P-201ENST00000496431 281 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 SNORA4.4-201ENST00000515921 135 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 RNU7-149P-201ENST00000516739 59 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 MIR7515-201ENST00000637837 67 ntBASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RTCBQ9Y3I0 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 RNU6-647P-201ENST00000364243 107 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 RNA5SP293-201ENST00000410527 113 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 snoU13.26-201ENST00000459452 105 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 SNORD33.1-201ENST00000516213 88 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 PRELID2P1-201ENST00000552837 301 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 AL670379.3-201ENST00000605040 251 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 JPX_2.1-201ENST00000614161 69 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 MIR5739-201ENST00000619803 80 ntBASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.48□□□□□ -1.85
RTCBQ9Y3I0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 U8.2-201ENST00000363156 134 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 MIR512-1-201ENST00000384913 84 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 MIR1253-201ENST00000408273 105 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 SNORA18.4-201ENST00000516440 124 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 RNU2-60P-201ENST00000517290 128 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 MIR3199-1-201ENST00000582434 88 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 U6.73-201ENST00000619194 103 ntBASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RTCBQ9Y3I0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 MIR504-201ENST00000385065 83 ntBASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 SNORA3.2-201ENST00000408221 125 ntBASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 Y_RNA.617-201ENST00000410920 90 ntBASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 AC123900.1-201ENST00000420390 96 ntBASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 AC093259.1-201ENST00000509755 300 ntBASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
RTCBQ9Y3I0 MTND5P32-201ENST00000560711 1802 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 MIR148B-201ENST00000362252 99 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 RNU6-1298P-201ENST00000362456 101 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 RNU6-743P-201ENST00000364151 106 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 RNU6-309P-201ENST00000364573 106 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 SNORD58C-201ENST00000365223 64 ntBASIC3.45□□□□□ -1.86
RTCBQ9Y3I0 AL161788.1-201ENST00000441805 169 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms