Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
FNDC3AQ9Y2H6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AC018630.2-201ENST00000534866 2403 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 MIR126-201ENST00000362291 85 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 Y_RNA.35-201ENST00000362601 101 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AL031121.1-201ENST00000406553 254 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AC003685.2-201ENST00000422795 395 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AC010401.1-201ENST00000463867 348 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AC091826.1-201ENST00000514065 313 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 SCGB1D5P-201ENST00000515134 247 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-341P-201ENST00000516973 96 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AC008507.4-201ENST00000585464 127 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AL591926.4-201ENST00000616895 298 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 AL121890.5-201ENST00000620848 304 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 ZNF271P-202ENST00000465539 1970 ntBASIC3.25□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-461P-201ENST00000364195 107 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 SNORD116-21-201ENST00000384507 92 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 SNORA44-201ENST00000384584 132 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 MIR548A1-201ENST00000385041 97 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 RNA5SP323-201ENST00000391094 133 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 AF228730.3-201ENST00000436691 102 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 AL353689.1-201ENST00000438895 199 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 RN7SL863P-201ENST00000462370 296 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 RN7SKP19-201ENST00000516016 252 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-693P-201ENST00000516134 107 ntBASIC3.24□□□□□ -1.89
FNDC3AQ9Y2H6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-755P-201ENST00000364400 103 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 SNORA8-201ENST00000384574 139 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 RNU6-443P-201ENST00000384780 107 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 AC063976.4-201ENST00000421971 163 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 AL021397.1-201ENST00000451806 248 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 RNU7-170P-201ENST00000459303 61 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 IGKV1-22-201ENST00000524313 326 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 AC025166.1-201ENST00000612411 163 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
FNDC3AQ9Y2H6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 SNORA1B-201ENST00000362535 133 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 RNU11-5P-201ENST00000391216 129 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 MIR1262-201ENST00000408276 93 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 SRIP3-201ENST00000413200 219 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 MTATP6P21-201ENST00000440681 189 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 ATP5J2P3-201ENST00000451550 258 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 AC021205.2-201ENST00000480069 347 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 NDUFA5P6-201ENST00000542110 379 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 MIR3186-201ENST00000577404 85 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 MIR3613-201ENST00000579844 87 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 AC004832.5-201ENST00000608677 401 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.22□□□□□ -1.89
FNDC3AQ9Y2H6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-1298P-201ENST00000362456 101 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-888P-201ENST00000363010 101 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-147P-201ENST00000383983 107 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 MIR1263-201ENST00000408324 86 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 RNA5SP229-201ENST00000410809 99 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 AL049830.1-201ENST00000468034 425 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 MIR2682-201ENST00000580305 110 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 AL353149.1-201ENST00000610667 244 ntBASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
FNDC3AQ9Y2H6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 RNU6-1292P-201ENST00000383856 107 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 MIR548A2-201ENST00000384956 97 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 Y_RNA.649-201ENST00000459077 103 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 TRBV12-1-201ENST00000479785 344 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 AL163195.1-201ENST00000496941 348 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 RNA5SP236-201ENST00000516169 116 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 MIR4672-201ENST00000583126 81 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
FNDC3AQ9Y2H6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 MTND5P18-201ENST00000445624 1801 ntBASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
FNDC3AQ9Y2H6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms