Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 AC080128.1-201ENST00000474389 1917 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 Y_RNA.528-201ENST00000384575 108 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 MIR520G-201ENST00000385064 90 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 SNORA12.1-201ENST00000390873 148 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 AC244505.4-201ENST00000434905 287 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 AL135938.1-201ENST00000443141 297 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 SSXP5-201ENST00000443473 287 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 MRPS17P9-201ENST00000511924 393 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 RNU6-991P-201ENST00000516168 107 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 UBL5P2-201ENST00000583788 219 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 MIR7515-201ENST00000637837 67 ntBASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZC3H4Q9UPT8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 MIR30E-201ENST00000362104 92 ntBASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 RNU6-412P-201ENST00000516434 106 ntBASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 IGKV1-22-201ENST00000524313 326 ntBASIC3.88□□□□□ -1.79
ZC3H4Q9UPT8 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 FO393413.1-201ENST00000402892 195 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 SNRPGP10-201ENST00000432323 225 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 RPS15AP28-201ENST00000435088 386 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 RPL23AP67-201ENST00000465341 474 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 NDUFA4P2-201ENST00000489989 244 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 RNU6-1291P-201ENST00000516591 104 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 MIR3616-201ENST00000584070 92 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 AC017071.1-201ENST00000564407 2204 ntBASIC3.87□□□□□ -1.79
ZC3H4Q9UPT8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 RNU1-70P-201ENST00000362618 164 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 SNORA68.1-201ENST00000364537 132 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 RNA5SP125-201ENST00000364843 120 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 AL357552.1-201ENST00000445254 415 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 AL109933.2-201ENST00000452651 260 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 AC068647.1-201ENST00000489539 2265 ntBASIC3.86□□□□□ -1.79
ZC3H4Q9UPT8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 RNA5SP229-201ENST00000410809 99 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 AC007064.1-201ENST00000412238 351 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 HMGN1P7-201ENST00000491722 313 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 SCARNA3-201ENST00000517097 143 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 AL449363.1-201ENST00000617815 186 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 AC106754.2-201ENST00000623006 233 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 MIR7157-201ENST00000635801 60 ntBASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZC3H4Q9UPT8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 AC245060.5-201ENST00000610778 3293 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 Y_RNA.267-201ENST00000364679 109 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 AC018634.1-201ENST00000437554 401 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 AC021205.2-201ENST00000480069 347 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 RNU6-856P-201ENST00000516959 98 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 MIR5739-201ENST00000619803 80 ntBASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
ZC3H4Q9UPT8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-1107P-201ENST00000364817 104 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 SNORD61-201ENST00000384252 73 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 MIR627-201ENST00000384979 97 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 SNORD72-201ENST00000390994 80 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNA5SP293-201ENST00000410527 113 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-1328P-201ENST00000410938 106 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 AC123900.1-201ENST00000420390 96 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 AC104332.2-201ENST00000429959 156 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 AC009969.1-201ENST00000438726 172 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 AC006539.3-201ENST00000454258 129 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNU1-41P-201ENST00000516161 162 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-1146P-201ENST00000516282 102 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNU1-48P-201ENST00000516400 162 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 SNORA70.19-201ENST00000516717 90 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-1149P-201ENST00000516810 97 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 SNORA31.26-201ENST00000517250 137 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 AC024614.2-201ENST00000577584 372 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 ICE2P2-201ENST00000483823 2787 ntBASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
ZC3H4Q9UPT8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 SNORD56.5-201ENST00000364281 72 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 Y_RNA.253-201ENST00000364562 112 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 SNORA70B-201ENST00000384210 135 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-106P-201ENST00000384405 107 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 SNORD12C-201ENST00000386307 89 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 MIR802-201ENST00000390235 94 ntBASIC3.82□□□□□ -1.8
ZC3H4Q9UPT8 RNU6-554P-201ENST00000410466 106 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms