Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SSXP5-201ENST00000443473 287 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 AL109933.2-201ENST00000452651 260 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 SNORD45.4-201ENST00000516629 73 ntBASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.65□□□□□ -1.67
TRIM35Q9UPQ4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 Y_RNA.241-201ENST00000364470 117 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 MIR490-201ENST00000384865 128 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 MIR670-201ENST00000390142 98 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 AC060773.1-201ENST00000421698 310 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 AL135938.1-201ENST00000443141 297 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 SNORA25.13-201ENST00000516395 103 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 AC103810.1-201ENST00000579873 453 ntBASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.64□□□□□ -1.67
TRIM35Q9UPQ4 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 snoU2-30.2-201ENST00000362805 70 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 SNORA80E-201ENST00000384744 137 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 SCARNA18B-201ENST00000458806 135 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-917P-201ENST00000516294 104 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 Vault.1-201ENST00000516474 102 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-1015P-201ENST00000517121 99 ntBASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.63□□□□□ -1.67
TRIM35Q9UPQ4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-198P-201ENST00000384258 104 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 Y_RNA.567-201ENST00000384736 106 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-1319P-201ENST00000390855 104 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-747P-201ENST00000390928 104 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 SNORD17-201ENST00000390930 237 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-241P-201ENST00000391148 104 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-177P-201ENST00000411257 104 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 RPS29P4-201ENST00000414733 161 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 AL450471.1-201ENST00000447509 127 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 AC110768.1-201ENST00000509222 400 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 MIR3690-201ENST00000580266 75 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 AL356274.2-201ENST00000624379 3752 ntBASIC4.62□□□□□ -1.67
TRIM35Q9UPQ4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 RNA5SP189-201ENST00000364920 115 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 MIR183-201ENST00000384958 110 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 RNU2-59P-201ENST00000410482 191 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 RN7SKP177-201ENST00000410567 355 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 RN7SL293P-201ENST00000481765 281 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 AC114811.1-201ENST00000507207 168 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 RPPH1-2P-201ENST00000516688 293 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 AC026333.2-201ENST00000542164 106 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 MIR6075-201ENST00000620782 95 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 MIR1248-201ENST00000629190 106 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
TRIM35Q9UPQ4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 RNU6-624P-201ENST00000363411 107 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 MIR23B-201ENST00000384832 97 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 RN7SL594P-201ENST00000470590 287 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 AC025518.1-201ENST00000479856 347 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 RNU7-153P-201ENST00000516455 62 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 U6.105-201ENST00000637379 88 ntBASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM35Q9UPQ4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-34-201ENST00000362441 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-12-201ENST00000362583 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 RNU4-35P-201ENST00000362588 141 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORA22.1-201ENST00000362701 134 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-29-201ENST00000362834 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-9-201ENST00000362912 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-21-201ENST00000362963 81 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-14-201ENST00000363090 81 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-41-201ENST00000363608 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-11-201ENST00000363616 82 ntBASIC4.59□□□□□ -1.67
TRIM35Q9UPQ4 SNORD115-5-201ENST00000363633 82 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms