Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
DDX41Q9UJV9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 RNU6-969P-201ENST00000383900 105 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 SNORA67.4-201ENST00000384688 142 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AL512604.1-201ENST00000404812 257 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 MIR1261-201ENST00000408659 82 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AL513328.1-201ENST00000446460 224 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AC022559.1-201ENST00000520905 205 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.99□□□□□ -1.93
DDX41Q9UJV9 AL049779.4-201ENST00000604500 156 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 Z82195.2-201ENST00000612348 18351 ntBASIC2.99□□□□□ -1.93
DDX41Q9UJV9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU6-862P-201ENST00000362804 105 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU6-674P-201ENST00000363831 107 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU6-682P-201ENST00000363843 106 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU4-10P-201ENST00000364383 140 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 SNORA8-201ENST00000384574 139 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU6-381P-201ENST00000391259 108 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 AL117342.1-201ENST00000404861 406 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU2-2P-201ENST00000410396 191 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNA5SP282-201ENST00000516355 108 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 MIR2681-201ENST00000581814 105 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 RNU2-4P-201ENST00000606190 192 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 AL137847.3-201ENST00000611521 109 ntBASIC2.98□□□□□ -1.93
DDX41Q9UJV9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX41Q9UJV9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DDX41Q9UJV9 RNA5SP270-201ENST00000411361 118 ntBASIC2.97□□□□□ -1.93
DDX41Q9UJV9 RPS4XP11-201ENST00000446897 772 ntBASIC2.97□□□□□ -1.93
DDX41Q9UJV9 Y_RNA.797-201ENST00000515977 94 ntBASIC2.97□□□□□ -1.93
DDX41Q9UJV9 AC011604.1-201ENST00000545978 196 ntBASIC2.97□□□□□ -1.93
DDX41Q9UJV9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.97□□□□□ -1.93
DDX41Q9UJV9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.93
DDX41Q9UJV9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
DDX41Q9UJV9 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.182-201ENST00000363880 111 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.240-201ENST00000364469 95 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 MIR616-201ENST00000385293 97 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 RNU11-3P-201ENST00000391111 133 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.621-201ENST00000411065 96 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 BX510359.4-201ENST00000423750 193 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 AC023449.1-201ENST00000454464 154 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.96□□□□□ -1.94
DDX41Q9UJV9 MIR4744-201ENST00000581563 82 ntBASIC2.96□□□□□ -1.94
DDX41Q9UJV9 AC018630.2-201ENST00000534866 2403 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
DDX41Q9UJV9 RNU6-1062P-201ENST00000383908 107 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 RNU1-138P-201ENST00000384093 164 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 RNA5SP465-201ENST00000391195 109 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 RNU6-383P-201ENST00000410864 94 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX41Q9UJV9 TRBV12-1-201ENST00000479785 344 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 SNORA31.11-201ENST00000516528 139 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 MIR6079-201ENST00000635807 62 ntBASIC2.95□□□□□ -1.94
DDX41Q9UJV9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
DDX41Q9UJV9 RNA5SP432-201ENST00000362480 116 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 RNA5SP393-201ENST00000363423 117 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 RNU4-41P-201ENST00000364426 143 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 RNA5SP496-201ENST00000391240 109 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX41Q9UJV9 RNU7-128P-201ENST00000517247 62 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX41Q9UJV9 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 AL391903.3-201ENST00000612158 163 ntBASIC2.94□□□□□ -1.94
DDX41Q9UJV9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX41Q9UJV9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX41Q9UJV9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC100821.1-201ENST00000523153 2479 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.203-201ENST00000364106 102 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 RNU6-312P-201ENST00000364629 107 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.464-201ENST00000384282 110 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 MIR518A2-201ENST00000384966 87 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC233266.1-201ENST00000454518 96 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC091021.1-201ENST00000468051 388 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 RNU6-1219P-201ENST00000516143 112 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 RNU6-341P-201ENST00000516973 96 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC069114.2-201ENST00000604699 304 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC242852.1-201ENST00000612151 96 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 AC244015.1-201ENST00000622301 99 ntBASIC2.93□□□□□ -1.94
DDX41Q9UJV9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.93□□□□□ -1.94
DDX41Q9UJV9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.75-201ENST00000362927 97 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 snoU2_19.4-201ENST00000364329 80 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.229-201ENST00000364347 113 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 Y_RNA.267-201ENST00000364679 109 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 SUMO1P4-201ENST00000429430 302 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.92□□□□□ -1.94
DDX41Q9UJV9 RPS26P45-201ENST00000471748 340 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 AL163195.1-201ENST00000496941 348 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 RNU6-1007P-201ENST00000516586 107 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 MRPS18CP4-201ENST00000535821 231 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 AL590808.1-201ENST00000618696 141 ntBASIC2.92□□□□□ -1.94
DDX41Q9UJV9 U6.108-201ENST00000637764 58 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms