Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MIR340-201ENST00000362125 95 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 RNU2-48P-201ENST00000410694 191 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 AF228730.3-201ENST00000436691 102 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MRPS17P9-201ENST00000511924 393 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 AC007751.1-201ENST00000529260 376 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MIR4679-2-201ENST00000578358 77 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MIR3129-201ENST00000581095 76 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SALL4Q9UJQ4 MTND5P32-201ENST00000560711 1802 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 RNU6-508P-201ENST00000363231 103 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 AL031121.1-201ENST00000406553 254 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 AC063976.4-201ENST00000421971 163 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 NDUFA4P2-201ENST00000489989 244 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 AC096725.1-201ENST00000514266 313 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 RN7SKP19-201ENST00000516016 252 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 RNU6-1291P-201ENST00000516591 104 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 RNU1-142P-201ENST00000516682 145 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 AC004832.5-201ENST00000608677 401 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 SCARNA15.3-201ENST00000626315 122 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 SCARNA4.1-201ENST00000628597 123 ntBASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SALL4Q9UJQ4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 Y_RNA.253-201ENST00000364562 112 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 Y_RNA.267-201ENST00000364679 109 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 SNORA12.1-201ENST00000390873 148 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 RNA5SP467-201ENST00000391274 118 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 RN7SL633P-201ENST00000488974 297 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 RNU6-1041P-201ENST00000516254 102 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 RN7SKP282-201ENST00000516824 299 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 RNU6-667P-201ENST00000517186 102 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 MIR3613-201ENST00000579844 87 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 MIR3616-201ENST00000584070 92 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 AC025166.1-201ENST00000612411 163 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 AL162274.2-201ENST00000614406 332 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 MIR6079-201ENST00000635807 62 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 AL136360.1-201ENST00000503377 1900 ntBASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
SALL4Q9UJQ4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SALL4Q9UJQ4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.21□□□□□ -1.89
SALL4Q9UJQ4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SALL4Q9UJQ4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 RNU6-1292P-201ENST00000383856 107 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 SNORD21-201ENST00000383953 95 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 SNORA1-201ENST00000384107 130 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 EDDM3CP-201ENST00000415977 425 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 AL353689.1-201ENST00000438895 199 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 AL021397.1-201ENST00000451806 248 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 SNORA59A-201ENST00000459326 152 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 RNU6-781P-201ENST00000516377 101 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 RNU6-341P-201ENST00000516973 96 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 AL358944.1-201ENST00000528537 144 ntBASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SALL4Q9UJQ4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 SNORA54-201ENST00000384281 123 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 RNA5SP323-201ENST00000391094 133 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 SRIP3-201ENST00000413200 219 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.649-201ENST00000459077 103 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 RN7SL863P-201ENST00000462370 296 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 AC087685.1-201ENST00000587507 141 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 MIR338-201ENST00000636369 67 ntBASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SALL4Q9UJQ4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 MIR126-201ENST00000362291 85 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 Y_RNA.35-201ENST00000362601 101 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 SNORD24-201ENST00000383884 75 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 SNORD61-201ENST00000384252 73 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 MIR592-201ENST00000384959 97 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 RNA5SP274-201ENST00000410484 108 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 AC003685.2-201ENST00000422795 395 ntBASIC3.19□□□□□ -1.9
SALL4Q9UJQ4 RNA5SP341-201ENST00000516261 117 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms