Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR548M-201ENST00000408260 86 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 MIR1283-2-201ENST00000408621 87 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 RNU6-855P-201ENST00000410395 104 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 U8.19-201ENST00000459095 133 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 AC010598.1-201ENST00000510378 103 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 SUMO2P18-201ENST00000518873 252 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.55□□□□□ -2
USP25Q9UHP3 AC091544.4-201ENST00000555268 342 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
USP25Q9UHP3 AC006435.5-201ENST00000624486 112 ntBASIC2.55□□□□□ -2
USP25Q9UHP3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.54□□□□□ -2
USP25Q9UHP3 SNORA27.1-201ENST00000362604 124 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNU6-271P-201ENST00000363858 105 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNU4-17P-201ENST00000365598 141 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNU6-418P-201ENST00000384035 107 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNA5SP450-201ENST00000411206 102 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNU6-57P-201ENST00000411348 103 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 HMGN2P3-201ENST00000433603 273 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 AL121890.1-201ENST00000435457 205 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 HMGN2P5-201ENST00000436882 273 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 RNU6-717P-201ENST00000459076 104 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 SNORD65B-201ENST00000459126 73 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 Y_RNA.662-201ENST00000516028 97 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 AC025647.1-201ENST00000517879 253 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
USP25Q9UHP3 AC009831.4-201ENST00000620744 325 ntBASIC2.54□□□□□ -2
USP25Q9UHP3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.54□□□□□ -2
USP25Q9UHP3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 RNU6-899P-201ENST00000363947 107 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 MIR1261-201ENST00000408659 82 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 AC008134.1-201ENST00000420943 193 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 AC016717.1-201ENST00000448918 286 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 RPS26P55-201ENST00000471178 356 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 AC074198.2-201ENST00000508153 258 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 AL137100.2-201ENST00000555786 315 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 MIR3169-201ENST00000578032 83 ntBASIC2.53□□□□□ -2
USP25Q9UHP3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.53□□□□□ -2
USP25Q9UHP3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
USP25Q9UHP3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 SNORA48.3-201ENST00000391081 134 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 AC016909.1-201ENST00000415916 166 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 MTND2P29-201ENST00000438595 412 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 RPL36AP21-201ENST00000490372 323 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 SNORD53-201ENST00000579969 78 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 AC068700.1-201ENST00000565862 3754 ntBASIC2.52□□□□□ -2.01
USP25Q9UHP3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.52□□□□□ -2.01
USP25Q9UHP3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
USP25Q9UHP3 AC245060.5-201ENST00000610778 3293 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 SNORA16B-201ENST00000364674 135 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNU6-746P-201ENST00000384112 109 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNU4-61P-201ENST00000411243 107 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RPS27P21-201ENST00000486977 252 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNU6-1219P-201ENST00000516143 112 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNA5SP200-201ENST00000516360 103 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNU6-255P-201ENST00000516957 105 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 RNU6-856P-201ENST00000516959 98 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.51□□□□□ -2.01
USP25Q9UHP3 MIR5688-201ENST00000580619 83 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 MIR5002-201ENST00000584713 97 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 AL590808.1-201ENST00000618696 141 ntBASIC2.51□□□□□ -2.01
USP25Q9UHP3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
USP25Q9UHP3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
USP25Q9UHP3 RNU6-381P-201ENST00000391259 108 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 MTCO2P33-201ENST00000402100 465 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 RN7SKP51-201ENST00000410781 304 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 AL392103.1-201ENST00000447000 198 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 RPS20P10-201ENST00000451209 253 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 RNU7-141P-201ENST00000459304 62 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 AC005786.1-201ENST00000588553 154 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 U1.36-201ENST00000620684 176 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 AC134026.1-201ENST00000623249 2239 ntBASIC2.5□□□□□ -2.01
USP25Q9UHP3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 RNA5SP138-201ENST00000365098 114 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 MIR526A2-201ENST00000390198 65 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 AC025033.1-201ENST00000463883 194 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USP25Q9UHP3 AC008555.8-201ENST00000623602 2168 ntBASIC2.49□□□□□ -2.01
USP25Q9UHP3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USP25Q9UHP3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 RNA5SP160-201ENST00000364866 120 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 RNU6-144P-201ENST00000383951 107 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 SNORA8.3-201ENST00000384679 139 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 MIR626-201ENST00000385032 94 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.48□□□□□ -2.01
USP25Q9UHP3 AL021397.1-201ENST00000451806 248 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 YWHAEP4-201ENST00000505390 198 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 RNA5SP20-201ENST00000515976 84 ntBASIC2.48□□□□□ -2.01
USP25Q9UHP3 RN7SKP164-201ENST00000516138 266 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms