Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RPL36AP21-201ENST00000490372 323 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 AC018868.1-201ENST00000491307 315 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 AC090255.1-201ENST00000495779 349 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 AC087441.2-201ENST00000529141 262 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 MIR4308-201ENST00000580634 81 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
DKK3Q9UBP4 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
DKK3Q9UBP4 SNORA16B-201ENST00000364674 135 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 RNU4-53P-201ENST00000410828 140 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 SUMO1P3-201ENST00000439961 304 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 RNY3P16-201ENST00000516338 101 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 RNU6-1212P-201ENST00000517023 104 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.39□□□□□ -2.03
DKK3Q9UBP4 MIR5688-201ENST00000580619 83 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 AC046143.2-201ENST00000609789 160 ntBASIC2.39□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.226-201ENST00000364337 114 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.240-201ENST00000364469 95 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 RNU6-923P-201ENST00000364753 107 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AC016909.1-201ENST00000415916 166 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.38□□□□□ -2.03
DKK3Q9UBP4 RPS26P55-201ENST00000471178 356 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 RNU6-861P-201ENST00000516745 106 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 MIR514B-201ENST00000516774 80 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AC100767.1-201ENST00000528178 123 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.38□□□□□ -2.03
DKK3Q9UBP4 MIR5007-201ENST00000583098 95 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 U4atac.1-201ENST00000618345 95 ntBASIC2.38□□□□□ -2.03
DKK3Q9UBP4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
DKK3Q9UBP4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.38□□□□□ -2.03
DKK3Q9UBP4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.37□□□□□ -2.03
DKK3Q9UBP4 MIR340-201ENST00000362125 95 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 SNORD114-30-201ENST00000364448 72 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 RNU4-52P-201ENST00000384209 138 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
DKK3Q9UBP4 SRIP3-201ENST00000413200 219 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 AL356320.1-201ENST00000429616 163 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 RPS20P10-201ENST00000451209 253 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 RNU6-856P-201ENST00000516959 98 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 AC022559.1-201ENST00000520905 205 ntBASIC2.37□□□□□ -2.03
DKK3Q9UBP4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.37□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.121-201ENST00000363309 113 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNU6-743P-201ENST00000364151 106 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 SNORA25B-201ENST00000365507 128 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNU6-144P-201ENST00000383951 107 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 MIR17-201ENST00000385012 84 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNU6-493P-201ENST00000391321 108 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNU7-141P-201ENST00000459304 62 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.36□□□□□ -2.03
DKK3Q9UBP4 SNORA4.4-201ENST00000515921 135 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNA5SP20-201ENST00000515976 84 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 RNU6-667P-201ENST00000517186 102 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
DKK3Q9UBP4 CENPCP1-201ENST00000533085 2578 ntBASIC2.36□□□□□ -2.03
DKK3Q9UBP4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.7-201ENST00000362352 102 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.172-201ENST00000363765 102 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 RNU4-17P-201ENST00000365598 141 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 RNU6-1323P-201ENST00000384025 107 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 RNU1-148P-201ENST00000384472 162 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 Y_RNA.571-201ENST00000384753 98 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 MIR626-201ENST00000385032 94 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 MIR526A2-201ENST00000390198 65 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 MTCO2P33-201ENST00000402100 465 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 RN7SKP223-201ENST00000410582 62 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.35□□□□□ -2.03
DKK3Q9UBP4 MIR3126-201ENST00000577443 74 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.15-201ENST00000611544 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.16-201ENST00000613119 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.12-201ENST00000613778 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.20-201ENST00000613956 192 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.9-201ENST00000615427 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.11-201ENST00000616345 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.2-201ENST00000616535 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.3-201ENST00000617785 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.19-201ENST00000618602 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 RNU2-1-201ENST00000618664 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
DKK3Q9UBP4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
DKK3Q9UBP4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
DKK3Q9UBP4 AC134026.1-201ENST00000623249 2239 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 AC068700.1-201ENST00000565862 3754 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 MIR21-201ENST00000362134 72 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 RNU6-1048P-201ENST00000364054 107 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 RNU6-407P-201ENST00000365280 104 ntBASIC2.34□□□□□ -2.03
DKK3Q9UBP4 RNU6-117P-201ENST00000365415 107 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms