Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AL354751.2-201ENST00000415471 210 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 AC091951.2-201ENST00000500762 203 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 RNU6-875P-201ENST00000516488 106 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 RN7SKP295-201ENST00000517264 153 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 AC015720.1-201ENST00000565251 277 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 AC006600.1-201ENST00000572529 153 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 MIR4778-201ENST00000577635 80 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 HSPE1P19-201ENST00000603327 295 ntBASIC1.24□□□□□ -2.21
CHCHD3Q9NX63 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 RNU6-626P-201ENST00000363354 107 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 U8.5-201ENST00000364528 136 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 SNORA22-201ENST00000383907 134 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.462-201ENST00000384268 102 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 SNORA22C-201ENST00000384614 134 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC092473.1-201ENST00000441098 221 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC233266.1-201ENST00000454518 96 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 RPL39P39-201ENST00000455840 151 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.632-201ENST00000459189 102 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.702-201ENST00000516843 96 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC022441.3-201ENST00000605737 136 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC242852.1-201ENST00000612151 96 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC244015.1-201ENST00000622301 99 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC106754.2-201ENST00000623006 233 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC091925.1-201ENST00000623204 462 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 MIR4272-201ENST00000635924 64 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 U6.92-201ENST00000636464 89 ntBASIC1.23□□□□□ -2.21
CHCHD3Q9NX63 AC005592.1-201ENST00000566527 1640 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 MIRLET7C-201ENST00000362160 84 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-1115P-201ENST00000362490 106 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU1-17P-201ENST00000363022 152 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.101-201ENST00000363154 102 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.252-201ENST00000364556 101 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.446-201ENST00000384178 104 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 MT-TD-201ENST00000387419 68 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-1054P-201ENST00000411293 104 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-1304P-201ENST00000411374 106 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 AC005042.3-201ENST00000453230 174 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-155P-201ENST00000516347 100 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 SNORA40.14-201ENST00000516543 86 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-922P-201ENST00000516753 99 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 RNU6-165P-201ENST00000517170 99 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 MIR548S-201ENST00000581352 82 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 MIR4762-201ENST00000585261 75 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 AP000942.3-201ENST00000603702 160 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 Y_RNA.772-201ENST00000606692 102 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
CHCHD3Q9NX63 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 RNU4-41P-201ENST00000364426 143 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 SNORA25-201ENST00000384384 134 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 SNORD12-201ENST00000391002 90 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 RNA5SP511-201ENST00000410487 115 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 AC024067.1-201ENST00000426199 223 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 RPS4XP11-201ENST00000446897 772 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 AC009474.2-201ENST00000451383 136 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 SNORD116-28-201ENST00000516123 91 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 MIR4423-201ENST00000580922 80 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 MIR3124-201ENST00000582636 67 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
CHCHD3Q9NX63 MIR378A-201ENST00000362177 66 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 RNU6-324P-201ENST00000363957 106 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 RNU6-457P-201ENST00000363999 107 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 Y_RNA.315-201ENST00000365117 102 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 Y_RNA.570-201ENST00000384750 101 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 MIR452-201ENST00000385020 85 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 MIR15B-201ENST00000385045 98 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 RPL23AP36-201ENST00000413895 458 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 Y_RNA.714-201ENST00000517065 90 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 RPS29P30-201ENST00000600975 111 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 AL121655.1-201ENST00000605811 308 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 AC068647.2-201ENST00000637380 353 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
CHCHD3Q9NX63 RNU6-60P-201ENST00000364792 103 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 RNU6-1199P-201ENST00000411249 104 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 CYCSP49-201ENST00000420810 319 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 Z98949.2-201ENST00000440996 144 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 SNORD13-201ENST00000459299 104 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 AC093852.1-201ENST00000503587 266 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 RNU6-475P-201ENST00000516073 104 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 RNU6-436P-201ENST00000516171 114 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 RNU6-917P-201ENST00000516294 104 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 RNU6-63P-201ENST00000516690 95 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 AC011604.1-201ENST00000545978 196 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 AC005972.2-201ENST00000604690 348 ntBASIC1.19□□□□□ -2.22
CHCHD3Q9NX63 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms