Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CUEDC1Q9NWM3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CUEDC1Q9NWM3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CUEDC1Q9NWM3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-944P-201ENST00000364023 107 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 Y_RNA.253-201ENST00000364562 112 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNY1P6-201ENST00000384193 109 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-220P-201ENST00000390919 107 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNA5SP424-201ENST00000390988 115 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 AC092427.1-202ENST00000430569 476 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 AC099677.2-201ENST00000436385 175 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNU7-164P-201ENST00000459221 62 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNU2-13P-201ENST00000515909 113 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-56P-201ENST00000516986 93 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 AC090115.4-201ENST00000609970 188 ntBASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.58□□□□□ -1.84
CUEDC1Q9NWM3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-1099P-201ENST00000363533 107 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-438P-201ENST00000365561 103 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-1189P-201ENST00000383958 107 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNVU1-14-201ENST00000384770 164 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 AL161788.1-201ENST00000441805 169 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 AC106707.2-201ENST00000484182 374 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 RNU7-70P-201ENST00000516941 66 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 MIR5187-201ENST00000583479 76 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 AC007229.1-201ENST00000590455 412 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 AL355297.2-201ENST00000604792 129 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CUEDC1Q9NWM3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-675P-201ENST00000384236 104 ntBASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 RN7SKP18-201ENST00000516005 275 ntBASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 SNORA31.26-201ENST00000517250 137 ntBASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 MIR3683-201ENST00000580847 82 ntBASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.56□□□□□ -1.84
CUEDC1Q9NWM3 MAPK10-373ENST00000641983 6772 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AL451046.2-201ENST00000403074 277 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AL035423.1-201ENST00000420331 213 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 RNU1-131P-201ENST00000458943 161 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 RNU7-123P-201ENST00000515911 60 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AL358944.1-201ENST00000528537 144 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AC022254.1-201ENST00000567857 235 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AP000553.6-201ENST00000641242 118 ntBASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CUEDC1Q9NWM3 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 Y_RNA.96-201ENST00000363092 109 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-497P-201ENST00000365316 104 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-1274P-201ENST00000384557 107 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 AC019288.1-201ENST00000557918 224 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 MIR4305-201ENST00000583252 102 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 AC018630.2-201ENST00000534866 2403 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 ZNF271P-202ENST00000465539 1970 ntBASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CUEDC1Q9NWM3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNU1-72P-201ENST00000362976 153 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNU1-96P-201ENST00000364163 162 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNA5SP51-201ENST00000364750 119 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNU1-133P-201ENST00000364867 167 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 Y_RNA.507-201ENST00000384500 99 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNU6-938P-201ENST00000411285 103 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 DBIP2-201ENST00000419076 262 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 AC004941.2-201ENST00000427009 228 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 AC009238.1-201ENST00000442165 424 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 AC009237.6-201ENST00000446969 424 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNA5SP57-201ENST00000459463 123 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 RNU7-61P-201ENST00000515897 61 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 MIR4666B-201ENST00000578142 81 ntBASIC3.53□□□□□ -1.84
CUEDC1Q9NWM3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 266.5 ms