Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC009831.4-201ENST00000620744 325 ntBASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 MIR8054-201ENST00000620877 86 ntBASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 MIR4302-201ENST00000638058 60 ntBASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 AC068647.1-201ENST00000489539 2265 ntBASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 AC008555.8-201ENST00000623602 2168 ntBASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
LCE3DQ9BYE3 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR383-201ENST00000362257 73 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP124-201ENST00000362739 110 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-1255P-201ENST00000363434 112 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.163-201ENST00000363702 113 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNVU1-6-201ENST00000364688 164 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.298-201ENST00000364960 107 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.328-201ENST00000365208 113 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-690P-201ENST00000365242 106 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.369-201ENST00000365568 117 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-424P-201ENST00000384367 105 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU1-148P-201ENST00000384472 162 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.544-201ENST00000384650 113 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR129-1-201ENST00000384972 72 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR759-201ENST00000390224 91 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-440P-201ENST00000390882 105 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 PTMAP2-201ENST00000397627 327 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AL034345.1-201ENST00000407768 123 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR1302-5-201ENST00000408164 150 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP293-201ENST00000410527 113 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP492-201ENST00000411330 114 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AL035398.1-201ENST00000430869 322 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AL606517.2-201ENST00000442855 241 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RPL39P34-201ENST00000477141 156 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 TRBV12-1-201ENST00000479785 344 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC008953.1-201ENST00000497334 318 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC110768.1-201ENST00000509222 400 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-240P-201ENST00000516098 97 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP208-201ENST00000516156 78 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNY4P20-201ENST00000516678 93 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 RNU6-579P-201ENST00000516879 102 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR4489-201ENST00000578869 62 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR3163-201ENST00000581592 73 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC078899.2-201ENST00000595282 212 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 VN1R85P-201ENST00000601587 426 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 SNORA62.6-201ENST00000606322 83 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 uc_338.28-201ENST00000612082 187 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 Y_RNA.818-201ENST00000618813 71 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MIR8059-201ENST00000620427 81 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AC091932.4-201ENST00000623386 200 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 SNORA50A-202ENST00000629536 136 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 AL589743.1-201ENST00000551932 2712 ntBASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
LCE3DQ9BYE3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 AC017071.1-201ENST00000564407 2204 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 BCLAF1P1-201ENST00000505813 2752 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP435-201ENST00000364044 108 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 SNORA1.2-201ENST00000365189 134 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP366-201ENST00000365454 123 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP87-201ENST00000384155 118 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 SNORA70.7-201ENST00000384159 133 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 SNORA48.1-201ENST00000390879 135 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RPS16P5-201ENST00000406501 404 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 SNORA11.3-201ENST00000408471 128 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 MIR1283-2-201ENST00000408621 87 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 MIR1302-4-201ENST00000408701 150 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNU6-554P-201ENST00000410466 106 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RPL32P35-201ENST00000415214 394 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNU6-893P-201ENST00000458841 100 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNU7-26P-201ENST00000458980 63 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RN7SL504P-201ENST00000494496 287 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNU6-998P-201ENST00000515894 101 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 SNORD36C-201ENST00000516733 66 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNA5SP481-201ENST00000516814 122 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 RNU7-70P-201ENST00000516941 66 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 IGLV3-17-201ENST00000519099 244 ntBASIC0.95□□□□□ -2.26
LCE3DQ9BYE3 IGKV3-31-201ENST00000523109 329 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms