Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC021269.2-201ENST00000532318 330 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC100821.1-201ENST00000523153 2479 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.81-201ENST00000362997 102 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AL031003.1-201ENST00000404229 172 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU6-257P-201ENST00000410238 98 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU6-321P-201ENST00000410912 106 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 EBAG9P1-201ENST00000418955 543 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 CR769767.1-201ENST00000436337 346 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU6-498P-201ENST00000459468 107 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU7-57P-201ENST00000459540 60 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC010409.1-201ENST00000487382 476 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 RNU7-121P-201ENST00000516604 62 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC013791.1-201ENST00000616619 62 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 snoZ196.1-201ENST00000625269 89 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 AC131280.1-202ENST00000624067 4211 ntBASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LRFN3Q9BTN0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AC134026.1-201ENST00000623249 2239 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 RNU1-148P-201ENST00000384472 162 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 RNU6-160P-201ENST00000384591 107 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.540-201ENST00000384638 111 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AC108667.1-201ENST00000428618 249 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 RN7SKP164-201ENST00000516138 266 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP137-201ENST00000516833 135 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 PRELID2P1-201ENST00000552837 301 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 MIR4744-201ENST00000581563 82 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 AC093831.2-201ENST00000624393 3427 ntBASIC2.61□□□□□ -1.99
LRFN3Q9BTN0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU6-103P-201ENST00000363686 107 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU6-1048P-201ENST00000364054 107 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU4-10P-201ENST00000364383 140 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.243-201ENST00000364481 109 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 SNORD14D-201ENST00000384390 87 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MIR626-201ENST00000385032 94 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MIR548B-201ENST00000385247 97 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU6-578P-201ENST00000390980 103 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MIR1185-2-201ENST00000408687 86 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 AC008134.1-201ENST00000420943 193 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU1-143P-201ENST00000516296 146 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU6-295P-201ENST00000516901 104 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MIR548X2-201ENST00000579776 100 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 MIR4431-201ENST00000579990 94 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 U1.23-201ENST00000610293 146 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 RNU1-68P-201ENST00000615382 146 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 U1.39-201ENST00000621562 146 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
LRFN3Q9BTN0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 SNORA72.4-201ENST00000384174 132 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 SNORA26.9-201ENST00000391322 122 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 RNU1-131P-201ENST00000458943 161 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 RN7SL75P-201ENST00000461926 281 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP281-201ENST00000516504 135 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.59□□□□□ -1.99
LRFN3Q9BTN0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.59□□□□□ -2
LRFN3Q9BTN0 AC010332.2-201ENST00000613083 1904 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 MAPK10-266ENST00000641066 6555 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
LRFN3Q9BTN0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LRFN3Q9BTN0 Y_RNA.293-201ENST00000364908 93 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 SNORA8.3-201ENST00000384679 139 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 RNU6-710P-201ENST00000410424 105 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 MTCO1P44-201ENST00000441935 243 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.58□□□□□ -2
LRFN3Q9BTN0 RNU6-221P-201ENST00000459541 99 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
LRFN3Q9BTN0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.58□□□□□ -2
LRFN3Q9BTN0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.58□□□□□ -2
LRFN3Q9BTN0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.58□□□□□ -2
LRFN3Q9BTN0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRFN3Q9BTN0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.58□□□□□ -2
LRFN3Q9BTN0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LRFN3Q9BTN0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
LRFN3Q9BTN0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 RNU6-899P-201ENST00000363947 107 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 RNU4-11P-201ENST00000365287 132 ntBASIC2.57□□□□□ -2
LRFN3Q9BTN0 Y_RNA.361-201ENST00000365515 120 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 174.5 ms