Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC245047.3-201ENST00000429428 127 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AL162725.1-201ENST00000435405 301 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AC117454.1-201ENST00000491120 168 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 RNA5SP200-201ENST00000516360 103 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 Y_RNA.679-201ENST00000516416 91 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 RNU6-1291P-201ENST00000516591 104 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 RNU2-56P-201ENST00000516826 190 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 RNA5SP364-201ENST00000516938 78 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AC015720.1-201ENST00000565251 277 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AC012433.1-201ENST00000588916 398 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 POLR3GP1-201ENST00000594073 261 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AC004832.4-201ENST00000608952 331 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 MIR6873-201ENST00000622788 63 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 U6.108-201ENST00000637764 58 ntBASIC1.94□□□□□ -2.1
NPAS1Q99742 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NPAS1Q99742 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPAS1Q99742 RNU6-112P-201ENST00000363599 104 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 SNORD27-201ENST00000363981 72 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 RNU6-1048P-201ENST00000364054 107 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 RNU6-117P-201ENST00000365415 107 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 Y_RNA.401-201ENST00000383965 117 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 MIR548H3-201ENST00000408771 118 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AL139156.1-201ENST00000412785 841 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AL356379.1-201ENST00000414105 126 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AL135786.1-201ENST00000415892 214 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.93□□□□□ -2.1
NPAS1Q99742 BTF3P11-201ENST00000426582 477 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 RNU7-128P-201ENST00000517247 62 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.93□□□□□ -2.1
NPAS1Q99742 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
NPAS1Q99742 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.93□□□□□ -2.1
NPAS1Q99742 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
NPAS1Q99742 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
NPAS1Q99742 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
NPAS1Q99742 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
NPAS1Q99742 Y_RNA.265-201ENST00000364677 108 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 Y_RNA.277-201ENST00000364754 102 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 AL603910.2-201ENST00000407268 136 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 Y_RNA.590-201ENST00000410140 107 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 RNA5SP425-201ENST00000410336 112 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 AL356320.1-201ENST00000429616 163 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS1Q99742 RPS26P45-201ENST00000471748 340 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS1Q99742 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS1Q99742 RPL23AP54-201ENST00000495129 419 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 RNA5SP481-201ENST00000516814 122 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.92□□□□□ -2.1
NPAS1Q99742 U2.14-201ENST00000615943 113 ntBASIC1.92□□□□□ -2.1
NPAS1Q99742 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
NPAS1Q99742 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
NPAS1Q99742 RNU6-801P-201ENST00000364087 105 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 U8.7-201ENST00000364940 136 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 Y_RNA.350-201ENST00000365409 98 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 Y_RNA.352-201ENST00000365439 102 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU6-1289P-201ENST00000384431 106 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU6-950P-201ENST00000384651 107 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU6-763P-201ENST00000390865 106 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 AC244636.1-201ENST00000421152 228 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NPAS1Q99742 HSPE1P9-201ENST00000440046 311 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU7-34P-201ENST00000459394 64 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 Y_RNA.668-201ENST00000516233 93 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU7-116P-201ENST00000516940 62 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RNU6-341P-201ENST00000516973 96 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.91□□□□□ -2.1
NPAS1Q99742 AC011604.1-201ENST00000545978 196 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 AP000942.4-201ENST00000604811 241 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
NPAS1Q99742 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.91□□□□□ -2.1
NPAS1Q99742 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
NPAS1Q99742 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
NPAS1Q99742 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NPAS1Q99742 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 Y_RNA.117-201ENST00000363294 101 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 RNU6-899P-201ENST00000363947 107 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 RNU6-740P-201ENST00000364734 105 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 SNORA20.1-201ENST00000364790 130 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 Y_RNA.293-201ENST00000364908 93 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 SNORA72.4-201ENST00000384174 132 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 RNU6-440P-201ENST00000390882 105 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 RN7SKP200-201ENST00000410564 320 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 Y_RNA.618-201ENST00000410949 107 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
NPAS1Q99742 RPS4XP11-201ENST00000446897 772 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 353.8 ms