Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RNU6-437P-201ENST00000459408 95 ntBASIC2.32□□□□□ -2.04
TIMP4Q99727 RNU7-116P-201ENST00000516940 62 ntBASIC2.32□□□□□ -2.04
TIMP4Q99727 AL355297.2-201ENST00000604792 129 ntBASIC2.32□□□□□ -2.04
TIMP4Q99727 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
TIMP4Q99727 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
TIMP4Q99727 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TIMP4Q99727 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.31□□□□□ -2.04
TIMP4Q99727 ZNF702P-202ENST00000434269 1966 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 RNU4-41P-201ENST00000364426 143 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 RNU6-643P-201ENST00000384018 107 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 Y_RNA.521-201ENST00000384560 114 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 HMGN2P35-201ENST00000412164 270 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.31□□□□□ -2.04
TIMP4Q99727 SNORA4.4-201ENST00000515921 135 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 AC015720.1-201ENST00000565251 277 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TIMP4Q99727 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
TIMP4Q99727 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TIMP4Q99727 Z82195.2-201ENST00000612348 18351 ntBASIC2.31□□□□□ -2.04
TIMP4Q99727 AC010332.2-201ENST00000613083 1904 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TIMP4Q99727 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.3□□□□□ -2.04
TIMP4Q99727 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TIMP4Q99727 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.3□□□□□ -2.04
TIMP4Q99727 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 RNU6-22P-201ENST00000384355 107 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 RNU6-376P-201ENST00000384731 106 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 MIR1253-201ENST00000408273 105 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 RNU2-63P-201ENST00000410792 194 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 RPL30P13-201ENST00000418873 348 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 CYCSP49-201ENST00000420810 319 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.3□□□□□ -2.04
TIMP4Q99727 AL445687.1-201ENST00000439946 251 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 MTCO1P44-201ENST00000441935 243 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 EEF1B2P7-201ENST00000451177 676 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.3□□□□□ -2.04
TIMP4Q99727 RPL36AP21-201ENST00000490372 323 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 AC093259.1-201ENST00000509755 300 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.3□□□□□ -2.04
TIMP4Q99727 RNU6-62P-201ENST00000516526 102 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 MIR3117-201ENST00000584034 78 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 MIR4438-201ENST00000585271 93 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 U4.3-201ENST00000621047 82 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 AC080100.1-201ENST00000624239 5356 ntBASIC2.3□□□□□ -2.04
TIMP4Q99727 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TIMP4Q99727 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 RNA5SP181-201ENST00000410246 98 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AC123900.1-201ENST00000420390 96 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.29□□□□□ -2.04
TIMP4Q99727 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 SNORA31.15-201ENST00000516771 132 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 RNU7-172P-201ENST00000517125 64 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 MIR4446-201ENST00000578505 67 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 MIR4435-1-201ENST00000582552 80 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AL929325.1-201ENST00000603096 117 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AL049861.1-201ENST00000603130 150 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AL137847.3-201ENST00000611521 109 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AC012640.5-201ENST00000623897 319 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AC006435.5-201ENST00000624486 112 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 AC009487.4-201ENST00000624969 3585 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 CENPCP1-201ENST00000533085 2578 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
TIMP4Q99727 AC245060.5-201ENST00000610778 3293 ntBASIC2.29□□□□□ -2.04
TIMP4Q99727 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TIMP4Q99727 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.28□□□□□ -2.04
TIMP4Q99727 SNORD45.3-201ENST00000363836 72 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU6-117P-201ENST00000365415 107 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU6-768P-201ENST00000384683 107 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 MIR95-201ENST00000385072 81 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 SNORA40-201ENST00000388090 126 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU6-220P-201ENST00000390919 107 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU6-1154P-201ENST00000391001 104 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU2-51P-201ENST00000410708 197 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.28□□□□□ -2.04
TIMP4Q99727 AC010154.1-201ENST00000425857 269 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 HMGN2P34-201ENST00000437647 269 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RPS12P2-201ENST00000439728 269 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.28□□□□□ -2.04
TIMP4Q99727 SNRPGP8-201ENST00000454064 226 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU2-34P-201ENST00000516534 121 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 RNU6-971P-201ENST00000516920 106 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 AC112693.2-201ENST00000556538 232 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 MIR5092-201ENST00000583139 88 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 MIR4298-201ENST00000584380 73 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.28□□□□□ -2.04
TIMP4Q99727 AL365222.1-201ENST00000614661 98 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.28□□□□□ -2.04
TIMP4Q99727 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 MIR6844-201ENST00000637122 62 ntBASIC2.28□□□□□ -2.04
TIMP4Q99727 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
TIMP4Q99727 RNU1-22P-201ENST00000363334 158 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 RNA5SP393-201ENST00000363423 117 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 MIR561-201ENST00000385216 97 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 AL512604.1-201ENST00000404812 257 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 RNU6-588P-201ENST00000410281 105 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 RNU2-48P-201ENST00000410694 191 ntBASIC2.27□□□□□ -2.05
TIMP4Q99727 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms