Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC022695.1-201ENST00000522089 237 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
PHOX2BQ99453 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.85□□□□□ -1.79
PHOX2BQ99453 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PHOX2BQ99453 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PHOX2BQ99453 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PHOX2BQ99453 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHOX2BQ99453 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.84□□□□□ -1.79
PHOX2BQ99453 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PHOX2BQ99453 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PHOX2BQ99453 MIR423-201ENST00000362201 94 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 SNORD35B-201ENST00000363660 87 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 SNORD38C-201ENST00000384381 69 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 S100A11P2-201ENST00000467589 312 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 RPL29P14-201ENST00000495837 428 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 RNU6-237P-201ENST00000515985 71 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 SNORD36C-201ENST00000516733 66 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 AC141557.1-201ENST00000540982 400 ntBASIC3.84□□□□□ -1.79
PHOX2BQ99453 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.84□□□□□ -1.79
PHOX2BQ99453 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.84□□□□□ -1.79
PHOX2BQ99453 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PHOX2BQ99453 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PHOX2BQ99453 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.83□□□□□ -1.8
PHOX2BQ99453 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHOX2BQ99453 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
PHOX2BQ99453 RNU6-820P-201ENST00000384273 107 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 SNORA11.4-201ENST00000408823 129 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 AL035398.1-201ENST00000430869 322 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 RPL39P25-201ENST00000449384 154 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 AC018868.1-201ENST00000491307 315 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 RNU7-123P-201ENST00000515911 60 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 XIST_intron.1-201ENST00000619444 68 ntBASIC3.83□□□□□ -1.8
PHOX2BQ99453 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHOX2BQ99453 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PHOX2BQ99453 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PHOX2BQ99453 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHOX2BQ99453 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PHOX2BQ99453 Y_RNA.10-201ENST00000362371 110 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 SNORA5B-201ENST00000363786 132 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 SNORA63D-201ENST00000364359 132 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 Y_RNA.344-201ENST00000365381 112 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 MIR1179-201ENST00000408703 91 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 RHEBP3-201ENST00000411920 351 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 AL109933.2-201ENST00000452651 260 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 RN7SL504P-201ENST00000494496 287 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 SNORA70.14-201ENST00000516205 110 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 SNORD115-40-201ENST00000606510 82 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 AL162274.2-201ENST00000614406 332 ntBASIC3.82□□□□□ -1.8
PHOX2BQ99453 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
PHOX2BQ99453 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PHOX2BQ99453 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
PHOX2BQ99453 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.81□□□□□ -1.8
PHOX2BQ99453 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PHOX2BQ99453 MFSD8-233ENST00000641482 4860 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 Y_RNA.107-201ENST00000363190 121 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 Y_RNA.388-201ENST00000383919 113 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.81□□□□□ -1.8
PHOX2BQ99453 RNU6-109P-201ENST00000516364 107 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 RNU6-184P-201ENST00000516514 107 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 RNU6-762P-201ENST00000517107 102 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 AP003327.1-201ENST00000529684 127 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.81□□□□□ -1.8
PHOX2BQ99453 AC078899.2-201ENST00000595282 212 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 FAM71BP1-201ENST00000604431 523 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 SNORA28-201ENST00000606769 126 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 U4atac.1-201ENST00000618345 95 ntBASIC3.81□□□□□ -1.8
PHOX2BQ99453 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PHOX2BQ99453 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PHOX2BQ99453 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHOX2BQ99453 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHOX2BQ99453 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHOX2BQ99453 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHOX2BQ99453 SNORD114-6-201ENST00000364393 72 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 MIR488-201ENST00000365739 83 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 Z98941.1-201ENST00000407764 100 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.8□□□□□ -1.8
PHOX2BQ99453 TRIAP1P1-201ENST00000427062 225 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 AC009238.1-201ENST00000442165 424 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 AC009237.6-201ENST00000446969 424 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 AC015726.2-201ENST00000620112 122 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 AC091932.4-201ENST00000623386 200 ntBASIC3.8□□□□□ -1.8
PHOX2BQ99453 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PHOX2BQ99453 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PHOX2BQ99453 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
PHOX2BQ99453 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PHOX2BQ99453 MIR450A2-201ENST00000385022 100 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 RNU6-220P-201ENST00000390919 107 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 RNU6-938P-201ENST00000411285 103 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 AC245047.3-201ENST00000429428 127 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 DEFB131E-201ENST00000532329 154 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 MALAT1.1-201ENST00000618249 95 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 AL035425.3-201ENST00000564206 4996 ntBASIC3.79□□□□□ -1.8
PHOX2BQ99453 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
PHOX2BQ99453 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.78□□□□□ -1.8
PHOX2BQ99453 AL596211.1-201ENST00000569873 2277 ntBASIC3.78□□□□□ -1.8
PHOX2BQ99453 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms