Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 SNORD115-25-201ENST00000362619 82 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 RNU6-487P-201ENST00000365430 104 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 RNU6-817P-201ENST00000391083 104 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 MIR1303-201ENST00000408625 86 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-1.61□□□□□ -2.67
CFAP54Q96N23 SLC2A13P1-201ENST00000531560 322 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AC008752.3-201ENST00000588113 712 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AL161798.1-201ENST00000604630 131 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 AC027279.3-201ENST00000625055 122 ntBASIC-1.61□□□□□ -2.67
CFAP54Q96N23 RNU6-905P-201ENST00000384434 107 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 AC010153.1-201ENST00000432862 727 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 RNU6-948P-201ENST00000516374 107 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 RNU6-856P-201ENST00000516959 98 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 AL512347.1-201ENST00000566420 503 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 RNU6-424P-201ENST00000384367 105 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 RPS3AP3-201ENST00000411933 242 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 AC090517.1-201ENST00000569307 266 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 MIR4423-201ENST00000580922 80 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 AC120024.3-201ENST00000603167 156 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 DPPA3P3-201ENST00000603842 430 ntBASIC-1.62□□□□□ -2.67
CFAP54Q96N23 MIR549A-201ENST00000385268 96 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 AC025459.1-201ENST00000504072 156 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 AC127455.1-201ENST00000565496 145 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 RPL17P51-201ENST00000605218 238 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 AC022306.2-201ENST00000617563 647 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-1.63□□□□□ -2.67
CFAP54Q96N23 SNORA24-201ENST00000384096 131 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 SNORD41.1-201ENST00000391000 69 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 RNU6-466P-201ENST00000391224 103 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 HMGN3P1-201ENST00000453847 193 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.63□□□□□ -2.67
CFAP54Q96N23 MIR4264-201ENST00000583520 66 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 CCDC58P2-201ENST00000417131 366 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 MTND1P32-201ENST00000433043 938 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 RPL7P42-201ENST00000481005 679 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 AL512506.1-201ENST00000613918 449 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 AC126544.2-201ENST00000625174 749 ntBASIC-1.63□□□□□ -2.67
CFAP54Q96N23 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.64□□□□□ -2.67
CFAP54Q96N23 PSMA6P3-201ENST00000428242 164 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.64□□□□□ -2.67
CFAP54Q96N23 RNU2-11P-201ENST00000459191 187 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 RNU6-927P-201ENST00000516199 100 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-1.64□□□□□ -2.67
CFAP54Q96N23 AL139418.1-201ENST00000613613 177 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 uc_338.10-201ENST00000621872 182 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.64□□□□□ -2.67
CFAP54Q96N23 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.64□□□□□ -2.67
CFAP54Q96N23 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 Y_RNA.302-201ENST00000364997 102 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 RNU6-1026P-201ENST00000384465 108 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 SNORD115-33-201ENST00000363723 82 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 RNU6-878P-201ENST00000384578 110 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AC114491.1-201ENST00000416095 246 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 MTATP6P14-201ENST00000455189 673 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AC110760.3-201ENST00000598794 467 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AL159153.1-201ENST00000619688 317 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.65□□□□□ -2.67
CFAP54Q96N23 SNORD115-35-201ENST00000365122 82 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AC007283.2-201ENST00000424739 197 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.65□□□□□ -2.67
CFAP54Q96N23 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.65□□□□□ -2.67
CFAP54Q96N23 RNU6-484P-201ENST00000384016 107 ntBASIC-1.66□□□□□ -2.67
CFAP54Q96N23 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.66□□□□□ -2.67
CFAP54Q96N23 AL158042.1-201ENST00000605338 460 ntBASIC-1.66□□□□□ -2.67
CFAP54Q96N23 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.66□□□□□ -2.68
CFAP54Q96N23 RNU6-703P-201ENST00000516946 107 ntBASIC-1.66□□□□□ -2.68
CFAP54Q96N23 SNRPGP1-201ENST00000553864 222 ntBASIC-1.66□□□□□ -2.68
CFAP54Q96N23 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.66□□□□□ -2.68
CFAP54Q96N23 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.67□□□□□ -2.68
CFAP54Q96N23 RNU6-843P-201ENST00000384454 104 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 MTCYBP39-201ENST00000437562 491 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 RNU7-14P-201ENST00000459331 62 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 RNU2-56P-201ENST00000516826 190 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 AC073464.1-201ENST00000429823 534 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 MIR8066-201ENST00000617280 78 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 SGO1P1-201ENST00000603525 1447 ntBASIC-1.67□□□□□ -2.68
CFAP54Q96N23 RNU6-28P-201ENST00000362378 107 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 SNORD93-201ENST00000408813 74 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-1.68□□□□□ -2.68
CFAP54Q96N23 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.68□□□□□ -2.68
CFAP54Q96N23 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 AC079781.2-201ENST00000446424 169 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.68□□□□□ -2.68
CFAP54Q96N23 RNU6-509P-201ENST00000363519 107 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 RNU6-164P-201ENST00000364604 103 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 MRPL42P3-201ENST00000401492 326 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 AC008134.1-201ENST00000420943 193 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 AL008636.1-201ENST00000625038 1018 ntBASIC-1.68□□□□□ -2.68
CFAP54Q96N23 RNU6-417P-201ENST00000384712 107 ntBASIC-1.69□□□□□ -2.68
CFAP54Q96N23 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
CFAP54Q96N23 C1DP5-201ENST00000525775 383 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms