Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNA5SP511-201ENST00000410487 115 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 RN7SKP192-201ENST00000411291 327 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AL135786.1-201ENST00000415892 214 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 RNU6-856P-201ENST00000516959 98 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC109810.1-201ENST00000534066 224 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC015720.1-201ENST00000565251 277 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 MIR4431-201ENST00000579990 94 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC090616.3-201ENST00000582184 217 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 POLR3GP1-201ENST00000594073 261 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AL355297.2-201ENST00000604792 129 ntBASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.88□□□□□ -1.95
CHAMP1Q96JM3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 RNA5SP125-201ENST00000364843 120 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 MIR561-201ENST00000385216 97 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 MIR1289-2-201ENST00000408360 111 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 RNU2-63P-201ENST00000410792 194 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 AL162725.1-201ENST00000435405 301 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 AC245047.8-201ENST00000456455 284 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 CKS1BP2-201ENST00000497342 240 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 RNA5SP445-201ENST00000515889 115 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 MIR4724-201ENST00000579485 89 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 MIR3616-201ENST00000584070 92 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 AC132825.6-201ENST00000638861 357 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 CENPCP1-201ENST00000533085 2578 ntBASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CHAMP1Q96JM3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 RNU1-22P-201ENST00000363334 158 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 RNU6-239P-201ENST00000390990 99 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 SNORA3.2-201ENST00000408221 125 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 AC060773.1-201ENST00000421698 310 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 RNA5SP320-201ENST00000516263 124 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 MIR3117-201ENST00000584034 78 ntBASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CHAMP1Q96JM3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-674P-201ENST00000363831 107 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-449P-201ENST00000383914 107 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 AC010409.1-201ENST00000487382 476 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 AC097462.1-201ENST00000514125 324 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-561P-201ENST00000516222 102 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU7-116P-201ENST00000516940 62 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-56P-201ENST00000516986 93 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNA5SP402-201ENST00000517148 110 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 RNU6-667P-201ENST00000517186 102 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 MTND1P7-201ENST00000632801 297 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CHAMP1Q96JM3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 RNA5SP68-201ENST00000363885 119 ntBASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 RPS27P22-201ENST00000478056 241 ntBASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 MIR6817-201ENST00000615588 66 ntBASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 AC138915.1-201ENST00000565427 1685 ntBASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
CHAMP1Q96JM3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 RNU6-859P-201ENST00000362728 107 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 SNORA25B-201ENST00000365507 128 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 RNU6-81P-201ENST00000365608 104 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 AL606845.1-201ENST00000404881 255 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 Z98742.3-201ENST00000418637 326 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 MIR5092-201ENST00000583139 88 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 MIR4438-201ENST00000585271 93 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 U6.73-201ENST00000619194 103 ntBASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.83□□□□□ -1.96
CHAMP1Q96JM3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 MIR367-201ENST00000362299 68 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 RNU6-131P-201ENST00000391144 107 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 RNA5SP425-201ENST00000410336 112 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 AL445687.1-201ENST00000439946 251 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 RNU6-437P-201ENST00000459408 95 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 SNORA4.4-201ENST00000515921 135 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 SNORD116-25-201ENST00000516517 92 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 MIR4648-201ENST00000580107 72 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 AL021707.8-201ENST00000609428 183 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.82□□□□□ -1.96
CHAMP1Q96JM3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms